Gardnerella vaginalis HMP9231: HMPREF9231_0590
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Entry
HMPREF9231_0590 CDS
T01939
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HMPREF9231_0590 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gvh03011
]
HMPREF9231_0590 (rpsA)
Ribosome [BR:
gvh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HMPREF9231_0590 (rpsA)
Bacteria
HMPREF9231_0590 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
RNase_II_C_S1
Caudal_act
Motif
Other DBs
NCBI-ProteinID:
AEF30873
LinkDB
All DBs
Position
696029..697531
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AA seq
500 aa
AA seq
DB search
MAENNNEVAKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKIDHDEVLLDIGYKTE
GVIPSRELSIKKDVDPDDVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK
DADGIVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELDKNR
NNVVLSRRQFLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL
SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQVVKGK
VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKGGEEVFVKVIDVDLDRRRISL
SLKQANEAVDPNSEDFDPALYGMPAEYDEEGNYKYPEGFDPNTNEWIAGYEQQREEWEAQ
YAAAHELWEQHKVFAAKELAAAAESAAADGQNEEAEKKPAKEEKKEEVASNYSSEAASEG
ALADSDQLAALREQLLSEKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaataataacgaagtcgccaaggttgcgattaatgatattggcaccgaagaa
gacttcatcaaggcagtcgattcaaccatcaagaattttgacgatggtgatttagttgaa
ggtacagtcgtaaagattgatcacgacgaagtattgttggacatcggctacaaaactgaa
ggtgtaatcccttcccgtgaactttccatcaagaaagacgttgatccagatgatgttgtt
gaagttggcgacaccatcgaagcccttgttgtaactaaggaagacaaggaaggacgtctt
attctctccaagaagcgtgcacagtatgagcgtgcttggggtgatattgagaagatcaag
gatgcagacggcattgttgaaggtaccgttattgaggctgttaagggcggcttgattgta
gacatcggtttgcgcggcttcttgccagcttccctcgttgaaatgcgtcgcgttcgcgat
ctttccccatacattggtcagaagattaaggctaagattcttgagcttgataagaatcgc
aacaatgttgtactttctcgtcgtcaattcctcgaggaaacccagtccgaagttcgcgag
accttcctttcgcagcttaagaagggtcagattcgtgaaggcgttgtgtcttccatcgtg
aacttcggcgcattcgttgatctcggcggtgttgacggtctcattcacgtttccgagctt
tcttggaagcatatcgatcacccatccgaggttgttaaggttggcgataaggtcactgtt
gaggttctcgacgttgatctcgatcgcgaacgcatctccctctcccttaaggcaactcag
gaagatccatggcagcgcttcgctcgtacccatgttcctggacaggttgttaagggtaag
gtcaccaagattgttcagttcggtgtgttcatctccgttgaagacggcatcgaaggcttg
gttcacatttccgagcttgctaaccgtcatgtagagaacccagaaactgttgttaagggt
ggcgaagaagtattcgttaaggttattgacgtagatctcgatcgtcgtcgtatctcgctc
tccttgaagcaggctaacgaggctgttgatccaaattctgaagatttcgatccagctctc
tacggcatgccagctgagtatgacgaagaaggaaactacaagtacccagaaggcttcgat
ccaaacactaacgagtggattgctggttacgagcagcagcgcgaagagtgggaagcacag
tatgcagcagctcacgaattgtgggagcagcacaaggtgtttgccgctaaggaactcgca
gctgcagcagaatccgcagccgctgatggtcagaacgaagaagctgaaaagaagccagct
aaggaagaaaagaaggaagaagttgcttccaactattcttctgaagcagctagcgaaggt
gctttagctgattccgatcagctcgcagctttgcgcgaacagcttttgagcgaaaagaag
tag
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