Gardnerella vaginalis HMP9231: HMPREF9231_0659
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Entry
HMPREF9231_0659 CDS
T01939
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00470
D-Amino acid metabolism
gvh01100
Metabolic pathways
gvh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF9231_0659 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF9231_0659 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gvh01011
]
HMPREF9231_0659 (alr)
Enzymes [BR:
gvh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HMPREF9231_0659 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
gvh01011
]
Precursor biosynthesis
Racemase
HMPREF9231_0659 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AEF31428
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All DBs
Position
782115..783470
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AA seq
451 aa
AA seq
DB search
MCKNSSIQAILQENYARALSTYPGQVIVDLKALRDNMRTLIERVSKDLQPAEKSPAVMGV
VKADAYGHGLIPSALAALAGGATWLGTAQPYEALRLRACGIDSSRCRILTWLTSAPTSLF
ADLINADIDISVGSLDSIDAVALAAKSVGAAARVHVKVDTGFGRNGFTPAGFSDALEKLS
EYSSQGLIEVIGQWSHLAVADCPDVPEFVSSTDRQIEQFHDFTRRMCEAGLEPKIRHLAN
TAATLNRPEIRFELVRPGIGLYGYEPDPVMGVPQTYDLRPAMTLQAQLGTVKSVEAGHGI
SYGRTYLTPDNTSTAIVPLGYADGILRAASGYDMQGSRHVNKPGGPVRVETNNGARILHV
SGRVCMDQFIVDLKGSAKELGVKEGDTVRLFGPGRGIEYAEPTADDWAAAAGTISYEIMT
GIGPRVPRLYKNAYEVLPKKDIKMLDEKSLI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaaattcgagtatacaagcgattttgcaagaaaactacgctcgcgccttaagt
acatacccgggtcaggtaatcgttgatttaaaagcgctcagggataatatgcgaacgctg
attgagcgtgtttctaaagatttgcagcccgcagaaaagtcgccagcagttatgggagtt
gttaaagcagacgcttatggtcacgggcttattcctagtgcgctcgcagctctagcagga
ggagcaacttggcttggcacagctcagccttacgaggctttgcgacttcgcgcgtgtgga
attgattcaagcagatgccgtattcttacgtggcttactagcgctccaacgtctcttttt
gctgatttaataaacgcggatattgatatttctgttggctcgcttgattctattgatgct
gttgcgctcgctgctaaatcggttggcgccgctgcgcgcgtacacgttaaggtagataca
ggatttggcagaaacggttttacgcctgcaggctttagtgatgctttagaaaaacttagt
gaatattctagccagggattaatcgaagttattgggcaatggagtcacttggctgttgct
gattgcccagacgttccagagtttgtgtcgtctacagataggcaaattgagcaattccac
gattttactcgcagaatgtgcgaagctggtttggagcctaaaatccgacatttggctaat
acggctgcaactcttaacagaccagagatacgatttgagcttgttcgcccaggaattgga
ttgtacggatacgagccagaccccgttatgggagtgcctcaaacttacgacttgcgtcca
gctatgactttacaagcgcaattaggaacagttaaatctgtagaagcaggtcacggcatt
tcatacggccgcacgtatttaacgccagacaatacaagcacagcaatcgttccactcggc
tatgcggatggcattttgcgcgccgctagcggatacgatatgcaaggatctcggcatgtt
aataagcctggaggaccagtgcgcgtagaaactaataacggtgctaggattttgcatgtt
tcggggcgcgtttgcatggatcaatttattgttgacttaaaaggcagtgctaaagagctt
ggggttaaagaaggagatacagtcaggctttttgggccaggcagaggtattgaatatgcg
gagccgacggcagacgattgggcggcggctgcaggaacaataagctacgagattatgact
gggattggccctagagttcctcgattgtataagaatgcttacgaagttttgcctaaaaaa
gacataaaaatgttggatgaaaaaagcttaatctaa
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