Gardnerella vaginalis HMP9231: HMPREF9231_0691
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Entry
HMPREF9231_0691 CDS
T01939
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00230
Purine metabolism
gvh01100
Metabolic pathways
gvh01110
Biosynthesis of secondary metabolites
Module
gvh_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
HMPREF9231_0691 (purD)
Enzymes [BR:
gvh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
HMPREF9231_0691 (purD)
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Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp_3
ATP-grasp
ATP-grasp_4
FapA_N
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AEF31836
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Position
complement(826004..827278)
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AA seq
424 aa
AA seq
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MKVLVVGSGAREHAIAHALLKGESVEEVTVAPGNPGIAADGIQTVNISQSDHDALIKFVK
DNNYDFAFIGPEVPLMNGIVDDFEAHGIAAFGPNKAAAQIEGSKDFAKKLMARHNVPTAS
YKTFDALEPARAYVLEHGAPIVIKADGLAAGKGVTVAMDEQTAVDALEDIFVDHRFGQAG
AKVVIEEFLQGQEFSLMSFVSGTDFWVMPISQDHKRANDGDTGPNTGGMGAYSPVPQISD
ETVQRAIDEIVRPTVEGLAKEGTPFTGVLYAGLIDTASGPKVIEFNARFGDPETEVVLPR
LTSDFGEAIFNILHGKEPTFTWIKNGVTLGVVLASEGYPGTLVTGTPIPQIPVDENQGQH
VYYAGVKSDEESGKLLTSSGRVALVQVHGDDVKDAQNNVYSILDKLNLPHMFFRHDIASK
ALDL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttttagtagttggttctggcgctcgcgaacacgctattgcacacgcgttactt
aaaggagaaagcgttgaagaagtaactgttgctcctggaaatcctggtattgcagcagat
ggaattcaaactgtaaacataagtcaatcagatcatgacgctcttattaagttcgttaaa
gacaataactacgattttgcgttcattggtcctgaagttccgcttatgaatggcattgtt
gacgattttgaagcgcatggaattgccgcttttggtccaaacaaagccgcagctcaaatt
gaaggctctaaagatttcgcaaaaaagcttatggctcgtcacaacgttccaactgcctcc
tacaaaacatttgacgctttggagcctgcacgcgcatacgttcttgagcatggtgctcca
attgttattaaagcggacggtttggctgctggaaaaggcgttactgttgctatggatgag
caaacagcagttgatgctttggaagatattttcgtcgatcatcgttttggtcaagctgga
gcaaaagttgttattgaagaatttttgcaaggtcaagagttttcacttatgagtttcgta
agcggaactgatttttgggttatgccaatttctcaagaccacaaacgcgctaacgacggc
gacactggtccaaatactggcggcatgggagcttatagtcctgttccacaaattagcgac
gaaacagttcagcgtgctattgacgagattgtgcgcccaactgttgaaggactagctaaa
gagggcacgccttttaccggtgtactttatgctggattaattgatacagcttcagggcct
aaagttattgagtttaatgctcgttttggagacccagaaaccgaagttgttcttccaaga
cttactagcgactttggtgaagctatttttaacattttgcatggcaaagaaccaacattt
acttggattaaaaatggcgtaactcttggagttgtattagcaagcgaaggctaccctggc
actttagttactggaactcctattcctcaaattcctgttgacgaaaatcaaggtcagcac
gtgtattatgcaggagtaaaaagcgatgaagaaagcggcaaacttcttacttcttcaggt
agagtagctcttgtgcaagtacatggagacgacgtaaaagacgctcaaaacaacgtctac
agcatattagataagcttaatcttcctcacatgttctttaggcatgacattgcgtcaaaa
gcactagacttgtag
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