Gardnerella vaginalis HMP9231: HMPREF9231_0722
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Entry
HMPREF9231_0722 CDS
T01939
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gvh03009
]
HMPREF9231_0722 (der)
Ribosome biogenesis [BR:
gvh03009
]
Prokaryotic type
GTPases
HMPREF9231_0722 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
Cytidylate_kin
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
Ras
Roc
AAA_18
AIG1
AAA_28
ABC_tran
AAA_16
AAA_22
AAA
Arf
SpoIVA_ATPase
AAA_17
Ploopntkinase3
ATP_bind_1
AAA_25
MeaB
ADK
Motif
Other DBs
NCBI-ProteinID:
AEF31705
LinkDB
All DBs
Position
859866..862070
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AA seq
734 aa
AA seq
DB search
MICVAIDGPAGVGKSSTSRALAQYYGFAYLDTGAMYRAAAWWCLKQGIDLSKQLELDEEG
NPTNSADAKRLNQIVEAVGALFTEDHAEFSVDPKNPVVVIDSEDISEELRSSEVSSHVST
VSSIPAVRRMLIAAQRAYIASESSEDSFSGGEGIVAEGRDITTVVAPNAQVRVLLTAREE
VRQARRDKQDIAQENLQNNQSKNNESEEDDIRARDAKDAKVTNFLKAADGVTTLDNSDLT
FEQTLDALVEIVDDAIEQDEYDRYAANLEGYDLDDEDRALLSGDFASDDESKDTKAVGVI
AVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGWEADVE
GIDSSIAQQAQVAVRLSDAVIFLVDGQVGLTATDERIVSMLRAAGKPITLAVNKVDDARS
EYLTAEFWKLGMGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFLTPEGLRRVALVGR
PNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRVDGEDWLFIDTAGIKRRQHKLTGA
EYYSSLRTQAAIERSELALILFDSSQPIAEQDLKVMSQAVDAGRAIVLVFNKWDLMDEFS
RQRMERLWKTEFERVTWAERVNLSAKTGWHTNRLARAMRTALDSWDKRIPTGKLNAFLGR
IQSAHPHPLRGGKQARILFATQASTRPPRFVIFATGFLEHGYRRFIERSLREEFGFEGTP
IQISVKVRDKKKRK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgatttgcgtagcaattgatggaccagcaggagtaggtaaatcttctacttctcgtgct
ttagcgcaatactatggttttgcgtatttagatacgggggcaatgtatcgagctgctgct
tggtggtgcttgaagcaaggtattgatttaagcaagcagcttgagttggatgaagaagga
aatccaacgaattctgcagatgcaaaacgcttgaatcaaattgttgaagctgttggagca
ttgtttacggaagatcatgctgaatttagtgttgatccaaaaaatcctgtagtcgtaatt
gatagtgaagatattagcgaagaattgcgttccagcgaagtttcttcgcacgtgtctacg
gtttcttcgattcctgcagttcgacgcatgcttattgctgctcagcgcgcgtatattgct
tcagagtctagtgaagattctttctcaggcggagagggaatagttgcagaaggacgcgat
attactactgttgtagctccaaatgctcaagttcgagtgcttcttactgctcgtgaggaa
gtgcgtcaagctcgcagagataagcaggatattgcgcaagaaaatttgcaaaataatcaa
tctaagaataatgaatctgaagaagacgatattcgcgctcgtgatgctaaagatgctaaa
gttacgaattttcttaaagctgcagacggtgttacaactctagataattctgatttaact
tttgagcagactcttgacgcgcttgtagagattgttgacgatgcaattgagcaagatgag
tacgaccgttatgctgcaaatcttgaaggctacgatcttgatgatgaagatcgtgcgctt
cttagtggtgattttgcaagcgatgatgaatcgaaagatacaaaagctgttggagtaatc
gccgttataggtcgaccaaacgttggaaaatcaacgcttgtaaatcgtattttgggtcat
cgtgtcgctgttgtagaagatactccaggtgttactagagatcgcgtaagttacgacgct
gagtgggctggaaccaacttcaagctggttgacactggcggctgggaagcagatgttgaa
ggcattgattcttctattgctcagcaagcgcaagtggcagtgcgtttaagcgatgctgtg
attttcctagtagatggtcaagttggtttaacagctacagacgagcgcattgtttcaatg
cttcgcgctgcaggtaagcctattactctggcagttaacaaggttgacgacgctagaagc
gagtatttaactgcagagttttggaagctcggaatgggtgagccttacggaatttctgca
atgcatggcagaggcgttggagatttgcttgacgcggctcttaactctttgaagaaagcg
aataaaacttcaggattcttgactccagaaggacttcgcagagttgctttagttgggcgt
ccaaacgttggtaagtcttcgcttttgaaccatttagctcatgaagaacgttctgttgta
aacgatttggctggaactactcgagatcctgttgatgaggttgtgcgagttgatggagaa
gactggctgtttattgacactgctggtattaagcgcaggcagcataagcttactggtgct
gaatactattcttcacttcgtacgcaagctgcgattgagcgttctgaacttgctttgatt
cttttcgattcttcccagccgattgcagagcaggatttgaaagttatgagccaggctgta
gacgcgggtcgagcaatcgtacttgtgtttaacaagtgggacttgatggacgaattttct
agacagcgcatggaacgcttgtggaaaactgagtttgagcgcgtaacttgggctgagcgc
gttaatctctccgcaaaaacaggatggcatacgaatcgtcttgcgcgcgctatgcgaaca
gctttagacagctgggataagcgcattcctacaggcaagctcaacgctttcttaggtcgt
attcagtctgctcatccgcatcctttgcgaggcggaaagcaagcgagaatcttgtttgct
actcaggcttctacgcgcccaccgcgtttcgtgatattcgcaacaggcttcttagagcac
ggttaccgtcgctttattgagcgttctcttcgagaagagtttggatttgagggaactcct
attcaaatctctgtaaaagtacgagataagaagaagcgcaagtaa
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