Gardnerella vaginalis HMP9231: HMPREF9231_0771
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Entry
HMPREF9231_0771 CDS
T01939
Name
(GenBank) ABC transporter, ATP-binding protein
Organism
gvh
Gardnerella vaginalis HMP9231
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ABC_tran_Xtn
AAA_16
AAA_18
MMR_HSR1
AAA_29
ATP-synt_ab
AAA_23
Arf
AAA_22
RsgA_GTPase
PduV-EutP
TsaE
nSTAND3
AAA_30
SRP54
TPR_1
CAP12-PCTIR_TIR
Zeta_toxin
MeaB
Motif
Other DBs
NCBI-ProteinID:
AEF30986
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Position
921355..922956
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AA seq
533 aa
AA seq
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MAIDAQGLTIQIGARTLLNPTDFHVTKGDKIGLVGRNGAGKTTLTRVITGEMLPAGGTVR
VSGGLGYLPQDTHAADPEQSALDRIMSARDISSIVSRIRKAEKEMTNPDPDIMTKAMNRY
DKAIEDFEKAGGYAVQSEAISMANSLGLPQEIMKQALGTLSGGQRRRIELARILFSDADT
LILDEPTNHLDADSIIWLRNYLKKFSGGFLVISHSTELLDEVVNKVWHLDAQLAQIDMYS
MGWKAYLHQRVVDEERRRREREVAEKKAERLMKQGIRLHAKATKAVAAQNMMRRAERLLS
ETSEAQSREKVADIRFPEPAPCGRTPIMAEDISKAYGSNIVFAGINLAIDKGSRVVILGY
NGAGKTTTLRILAGEESADTGSVNYGHGCKIGYFAQEHDTLDLDATVLENLQHVAPDLND
TQARSMLGSFLFSGDDAMKPAKVLSGGEKTRLALATLVTSKANVLLLDEPTNNLDPASRD
EILKAIAKYEGAIVLVTHDEGAVLALNPERVLLMPDGDEDLWSDDYLDLVAEE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctattgacgcacaaggattaactatacaaattggtgcgcgtacgctattaaaccct
accgactttcatgtaacaaaaggcgacaaaatcggcttagttggaaggaatggagctgga
aaaacaactcttacacgagtaataacaggagaaatgctcccagctggcggaactgtacga
gtaagcggtggattgggatatctaccacaagatactcatgcagcagacccagaacaaagc
gcgttagataggattatgagcgctcgcgacatttcatcaatcgtatctcgtatacgaaaa
gcagaaaaagagatgacgaatccagatccagatattatgacgaaagccatgaatcgctac
gataaggccattgaagactttgaaaaagctggtggatacgctgttcaatcggaagcaata
tcgatggcaaacagccttgggcttccacaagaaattatgaagcaagctcttggaactcta
tctggcggccaacgtagacgaattgaacttgcacgaatacttttctccgatgcagacacg
ctgatattagatgagcctactaaccatttagatgcagattctataatttggctgagaaac
tatttgaaaaaattctctggtggattcttagtaatatcccattcaacagaattgctagat
gaggttgtaaataaagtctggcatttagatgcacaattggctcaaatagacatgtattca
atgggttggaaagcatacttacatcaacgcgttgtagacgaagagcgtagacgcagagaa
cgagaagtggctgaaaaaaaagctgaacgccttatgaaacaaggtattcgtttacatgca
aaagcaacaaaagcagtagcagctcaaaacatgatgcgtagggctgaacgtctgttaagt
gaaacaagcgaagcacaaagtcgcgagaaagtagcagatattcgttttccagaacctgct
ccttgcggacgaacacctattatggctgaagatatttcaaaagcttatggatccaatatt
gtatttgctggcataaatttggctatagataaaggttcaagagttgttattcttggatat
aacggtgctggtaaaacaaccactttgcgtattctagctggagaagaaagtgcagatact
ggcagcgtaaactatgggcatggctgcaagattggctattttgctcaggaacacgacact
ttggatttagatgcgacagtattagaaaatcttcagcatgttgctccagatttaaatgac
actcaagcaagatctatgctaggaagcttcctattttctggagatgacgcaatgaagcca
gctaaagtgctttcgggcggcgaaaaaactcgtctagcgttggcgactcttgtaacttca
aaagcaaacgtgctgttgctcgatgagcctactaacaatttagatccagcttctagagac
gaaattcttaaagccattgcaaaatacgaaggcgctattgtattggttactcacgatgaa
ggagcagttcttgcgttaaaccctgaacgagttcttcttatgccagacggtgacgaagat
ttgtggagtgatgactatcttgatttggttgcggaagaatag
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