Gardnerella vaginalis HMP9231: HMPREF9231_0805
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Entry
HMPREF9231_0805 CDS
T01939
Symbol
pyrF
Name
(GenBank) orotidine 5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00240
Pyrimidine metabolism
gvh01100
Metabolic pathways
gvh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HMPREF9231_0805 (pyrF)
Enzymes [BR:
gvh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
HMPREF9231_0805 (pyrF)
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GFIT
Motif
Pfam:
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
AEF31307
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All DBs
Position
complement(958953..959852)
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AA seq
299 aa
AA seq
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MTESIREQELQAQRSDFGLRLKNAMAKYGPLCVGIDPHRKMLLNWGYKMDAQGAELFSMR
MLQAMNGRAAAVKFQSSMFERYGSKGFAALERVLYAARQMDVITIVDCGHGGLSTTISAL
ADAYFKPDAPLLTDAITLLPYYGARSMGGLINEALNNGRGVFIASLTSNREGASLQTAIR
QTGSYRGTTVAHGIAQTAQIFNNNTKGMGSVGLIVGATIGDWMNGGGIDLTSFTGPILSP
GYGWQGAEANDLKTVFAGTHGNVLVTVSRSIASHGPDIGALSTATERIAWDIRQALMDS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaagcatacgagagcaggaattgcaggcgcaaagatccgattttggattgcgt
ctaaaaaacgctatggcaaaatacggtccattatgcgttggcatagatccgcaccgcaag
atgctgcttaattggggatacaagatggatgctcaaggagcagaattgttctccatgcgt
atgcttcaggccatgaacggcagagctgctgccgtaaaattccagtcgagcatgttcgag
cgttacgggtctaaggggttcgcggcgctcgaacgagtgctgtatgctgcaagacaaatg
gacgtaattactattgttgattgtggtcatggtggtttgtctacaacaatctctgctctt
gcagacgcttattttaagccagatgcgcctcttcttactgatgctattacacttcttccg
tattacggagctaggtcaatgggtgggttgattaatgaggctcttaataatggcaggggc
gtgtttattgcttctctaacgtctaatcgcgaaggcgctagcttgcaaactgctattcgt
cagactggttcctaccgcggcacaactgttgctcatggtattgctcaaactgcgcaaatt
tttaacaataatacaaagggcatgggttccgttggcttaattgttggagccactattgga
gattggatgaatggcggtggaatcgatttaacgagttttactggtcctattctttctcca
ggttacggttggcagggagcggaagctaacgatttgaaaacggtttttgctggtacgcat
ggaaatgttttagtaacagtttctaggtctattgcttctcatggtccagatattggtgca
ttatctactgcaactgaacgaatagcttgggatattcgtcaagctttaatggattcatga
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