Gardnerella vaginalis HMP9231: HMPREF9231_0874
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Entry
HMPREF9231_0874 CDS
T01939
Name
(GenBank) putative dihydrodipicolinate synthase
KO
K22397
2-dehydro-3-deoxy-D-pentonate aldolase [EC:
4.1.2.28
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00040
Pentose and glucuronate interconversions
gvh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HMPREF9231_0874
Enzymes [BR:
gvh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.28 2-dehydro-3-deoxy-D-pentonate aldolase
HMPREF9231_0874
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Motif
Pfam:
DHDPS
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEF30992
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All DBs
Position
1047808..1048722
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AA seq
304 aa
AA seq
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MTTSSSAKLDLHAFKGVFCPSITVSKDDGNIDYNLWAKHLDHLIDAGINGILIFGSIGEF
YAYPLSVKKEAAKFAIEHVNHRVPVLIGVGNTNLNEVLDFTKFAQSCGADAVVAVSPYYF
GPTAPTAERYFGAIANATSLPVILYNFPARTGSDLTPSLVASLAEKYPNIVGIKDTVDTI
SHTRAMIEATRRVNPDFVVFSGFDEYYTPNRIAGGNGVICGLTNVEPETFASLHKAYEAG
DFAHLIECAKRISHLMAVYNTTDLFISAIKAAVNLKGLPISTLVREPASQVNSEQIEAIR
ALLK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgactacttctagtagcgcaaagcttgatttgcatgcttttaagggcgttttctgccca
tcaataactgtaagcaaagatgacggaaacattgactacaacttatgggcaaagcactta
gaccatctgattgatgctgggattaatggcatattgatttttggcagcatcggcgaattc
tacgcatatccacttagcgtaaaaaaggaagctgctaagtttgctattgaacatgttaat
cacagagttccagttcttataggcgttggaaacacaaatcttaacgaagtacttgacttt
actaagtttgcgcaaagttgcggagcagacgctgttgtagctgtatctccatactacttt
ggaccaactgcaccaactgccgaacgatactttggcgcaatagctaacgcaactagcttg
cccgttattctatacaacttccctgctcgaactggcagcgatttaacaccaagcttagtt
gcaagtcttgctgaaaaatacccgaatattgttggtattaaagatacggtagatactata
agccatactcgcgcaatgattgaagccactagacgcgtaaacccagatttcgttgttttc
tctggctttgatgagtattacactcctaacaggattgctggaggaaacggcgtgatttgt
ggtcttacaaatgtagagccagaaacttttgcatctttgcataaggcgtatgaggctggc
gattttgcacatcttattgaatgtgctaaaagaatcagccatttgatggcagtttacaac
actaccgacttgtttatttctgctattaaagctgctgtaaatcttaagggattgccgatt
agcacgcttgttcgcgagcctgcaagtcaagttaatagcgagcaaatcgaagcaattcgt
gcgctgcttaagtaa
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