Gardnerella vaginalis HMP9231: HMPREF9231_0898
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Entry
HMPREF9231_0898 CDS
T01939
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF9231_0898 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gvh03019
]
HMPREF9231_0898 (groL)
03110 Chaperones and folding catalysts [BR:
gvh03110
]
HMPREF9231_0898 (groL)
03029 Mitochondrial biogenesis [BR:
gvh03029
]
HMPREF9231_0898 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gvh04147
]
HMPREF9231_0898 (groL)
Enzymes [BR:
gvh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF9231_0898 (groL)
Messenger RNA biogenesis [BR:
gvh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF9231_0898 (groL)
Chaperones and folding catalysts [BR:
gvh03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF9231_0898 (groL)
Mitochondrial biogenesis [BR:
gvh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF9231_0898 (groL)
Exosome [BR:
gvh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF9231_0898 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HMPREF9231_0898 (groL)
Exosomal proteins of breast cancer cells
HMPREF9231_0898 (groL)
Exosomal proteins of colorectal cancer cells
HMPREF9231_0898 (groL)
Exosomal proteins of bladder cancer cells
HMPREF9231_0898 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEF31251
LinkDB
All DBs
Position
complement(1073251..1074876)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAYEEDARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID
LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE
KASEAIVKELLASAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNK
FGLDLDFTEGMRFDKGYISPYFVTNAEDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK
SGKPLLIIAEDVDGEALPTLVLNKIRGTFNTVAVKAPGFGDRRKAMLQDMAILTGAQVVS
DDLGLKLDSIDASVFGHAAKVIVSKDETTIVSGAGSKEDVEARVAQIRAEIENTDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA
AAKVEKSADIVALSGEEATGAAIVFRAVEAPIKQIAQNSGVSGDVVLNKVRELPEGEGFN
AATNTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEKPAAAPQAGAEMG
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagattattgcctatgaagaagatgcccgtcagggtatgcttgctggtcttgat
aagcttgcaaatacagtaaaggtgactcttggtccaaagggtcgtaacgttgttcttgat
aagtcttacggcgccccaaccatcactaatgatggcgtttcaatcgctaaggagatcgat
cttgaagatccatacgagcgtattggcgccgaattggtaaaggaagttgctaagaagact
gacgacgttgcaggtgacggcactacaaccgctaccgtgttggctcaatctctggtgcac
gaaggcttaaagaatgttgttgctggtagcaacccgattgctcttcgtcgcggaattgaa
aaggcttcagaagcaattgttaaggaacttctcgcatctgctaaggatgttgaaacaaag
gatcagattgcagctactgcaactatttctgcagcagatcctgaagttggcgaaaagatt
gctgaagctttggataaggttggtcaggacggtgttgttaccgttgaagacaacaacaag
tttggtcttgatttggacttcactgaaggtatgcgttttgataagggttatatttcccct
tacttcgtcactaatgcagaagatcagactgctgttcttgaagacccatacattttgctc
acttctggcaaggtttctagccagcaggacattgttcatgttgctgaacttgttatgaag
tctggtaagccattgctcattattgctgaagatgttgatggcgaagcattaccaactctt
gttcttaacaagattcgcggtactttcaacactgttgcagtaaaggctccaggatttggc
gatcgccgtaaggcaatgcttcaggatatggctattttgactggtgctcaggttgtttct
gacgaccttggtttgaagcttgattctatcgacgcttctgtgtttggccatgctgcaaag
gtgattgtttctaaggatgaaacaactatcgtttctggcgctggctctaaggaagatgtt
gaggctcgtgttgctcagattcgcgccgaaattgagaacactgattccgattacgatcgc
gaaaagcttcaggagcgtcttgctaagctcgctggcggcgttgctgttattaaggttggt
gctgctacggaagttgaggctaaggaacgtaagcatcgcattgaagatgcagttcgtaat
gctaaggctgctatcgaggagggtttgcttccaggcggtggtgtagctttggttcaggct
gccgctaaggttgagaagtctgctgatattgttgctcttagtggagaagaagccacgggt
gctgcaattgtgttccgtgctgtagaagctccaatcaagcagattgctcagaattccggc
gtttctggagacgttgtgctcaacaaggtccgtgagcttccagaaggcgaaggcttcaat
gctgcaactaatacttatgaagatttgttggctgcaggcgttaccgacccagttaaggta
actcgttctgctctacagaatgctgcttctatcgctggcttgttcttaactacagaagct
gtggttgctaataagcctgagaagccagctgctgcaccacaggctggcgcagagatgggc
tactaa
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