Gardnerella vaginalis HMP9231: HMPREF9231_0965
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Entry
HMPREF9231_0965 CDS
T01939
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF9231_0965 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gvh01007
]
HMPREF9231_0965 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gvh03016
]
HMPREF9231_0965 (pheT)
Enzymes [BR:
gvh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HMPREF9231_0965 (pheT)
Amino acid related enzymes [BR:
gvh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HMPREF9231_0965 (pheT)
Transfer RNA biogenesis [BR:
gvh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF9231_0965 (pheT)
Prokaryotic type
HMPREF9231_0965 (pheT)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AEF30894
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All DBs
Position
complement(1157364..1159988)
Genome browser
AA seq
874 aa
AA seq
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MPMVDIDWLKDHVEVPEGLTYEQLAKDLVQVGLEEEEIHDSQVTGPIVVGYVVDAIPEPQ
KNGKIINWCHVDVGDKYNEVDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLPGDFKIE
PRKTYGHISNGMCASERELGLGDSHDGIILLREYGFSKAEYDALKPGDDAMSLLHLNKPL
LEINITPDRGYAFSYRGVAREYHHSTGATYTDPVIELNNKADQVVSMSDGASKDIEVSIE
DNNPIHGVVGCDRYYARVVRNFNPDSSSPNWMRRRLTRAGMRGISLAVDVTNYVMLDLGQ
PLHAYDLDKIEGPIVVRRAKAGEHLTTLDGKDRELNVEDLLICDSPKGNHGSRVLGLAGV
MGGMYGEVTSETKNILVEAAHFDPVSIARTARRHKLPTEASRRFERGVDTQLQPAAAQMA
VTMLSEFGSGEPSNTPTDVNNTVDRNVIVFKASEVERVSGLSIDLNRISDILTDIGCSVA
GGGNGSFSVLPPTWRPDLNDPCDLVEEIARLVGYDEIPVKVPAVPVTGKTGLTQEQATRR
AIAYELAEMGLVESLSYPFVGKEDFDAFREDVDSVAEVSVKIANPLAGDRPWLRRNVLTT
LAGTVRRNIRRGLSNVSLYELGHVYFADPNAPAIPALPGSVRPTDAQLAALDAGLPKQPL
HVAALFTGEAEETGWLGTHREVDWSDAVEAVNRLGKRIGVAFDVRQINSDDVPASWHPGR
TAKVYIPVDGADDVEIGIVGELHPQVDENLGLPKHSAAFELDLSALFDAMQVKPVQAKPV
STFPPVKQDFAFVAPSSLTAHDLKEAIVKASGDLLESVELFDVYEGEQLGEGLRSLAYSV
TFRASDRTLSSDDMEAVREAITKSAQKLHATLRV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgccaatggtagatattgactggcttaaagatcatgttgaagtgccagaaggtttgact
tacgagcagcttgctaaagatttggtgcaagttggcttagaagaagaagagattcacgac
tctcaagttacaggtcctattgttgtaggatacgttgttgatgctattcctgagccgcaa
aaaaatggcaaaattattaattggtgccatgttgatgttggagataaatacaacgaggta
gacgaaaatggcaataaagttcctcgtggaattatttgtggcgctccaaatatggctgct
ggagaaaaagttgttgtaactcttcctggggcagttttgcctggcgattttaagattgag
cctcgcaaaacttacggccacatttctaatggaatgtgcgcatccgagcgcgagcttggt
ttgggagatagccacgatggcattattttgcttcgcgaatacggtttctctaaagctgaa
tatgatgctttgaaacctggagacgacgcaatgtcgcttcttcacttaaacaagcctttg
ctggaaattaacatcactcctgatcgtggatacgcgttttcttataggggtgttgcgcgc
gaatatcaccattcaactggtgcaacttacactgatccagtaattgaacttaataataaa
gctgatcaagtagtttctatgtctgatggagcttctaaagatatagaagttagtattgaa
gataataatcctattcatggtgttgttggatgcgaccgttactacgctcgcgttgttaga
aactttaatccagattcttctagccctaattggatgcgtaggcgtttaactcgtgctgga
atgcgtggtatatctcttgcagtagacgttacaaattacgtaatgctcgacttaggtcag
cctcttcacgcttatgatttagataagattgaaggtcctattgttgttcgccgcgctaaa
gctggagagcatttaacaactttagatggcaaagacagagagcttaacgttgaggacttg
cttatttgcgattctccaaagggaaatcacggttcgcgtgttcttggacttgctggcgta
atgggcggaatgtatggagaagtaacgagcgaaacgaagaatattcttgttgaagctgca
cactttgaccccgtttctattgctcgtacagctcgtagacacaagcttccaaccgaggct
tctcgtaggtttgagcgcggagtagatactcagcttcagcctgcagctgcgcaaatggct
gttacaatgcttagcgagtttggctctggagagccttctaatacgcctacagacgtaaac
aatactgttgatagaaacgttattgttttcaaagctagcgaggtagagcgtgtttctggc
ttaagcattgatttgaaccgcattagcgatattcttacggatattggttgctcggttgct
ggcggcggaaatggttcgttctctgttttgcctccaacttggcgcccagacttgaatgat
ccatgcgatttggttgaagaaatcgcgcgtttggttggctacgatgagattcctgttaag
gttccagctgttcctgttactggcaaaactggtttaacgcaggaacaagcaactcgtaga
gctattgcttatgagcttgcagaaatgggcttggttgaatctttgagctacccatttgtt
ggtaaggaagattttgatgctttccgcgaagacgttgattctgttgctgaagttagcgta
aaaatcgcaaatcctttggcaggagaccgtccttggcttcgcaggaatgttcttaccact
ttagctggaacggttcgcagaaatattcgccgtggcttgagcaatgtttcgctttatgag
cttggccacgtgtattttgcagatcctaatgctcctgcaattcctgctttgcctggctcg
gttcgccctacggatgctcagcttgcagctttggatgcaggtttgcctaagcagcctttg
cacgttgcagcgctttttactggcgaagcagaagaaactggttggcttggaactcataga
gaagttgattggagtgatgctgtagaagctgttaatcgtttaggaaagcgaatcggcgtt
gcttttgacgttcgtcagattaattctgatgatgttcctgcttcttggcatccaggtcgt
accgcgaaggtgtatattcctgttgatggtgccgacgatgttgaaattggtattgttgga
gagcttcatcctcaggttgatgagaatttgggtttgccaaagcactctgcagcattcgag
cttgatttgagcgcattgtttgatgctatgcaagttaagcctgttcaggcaaaacctgtt
tctacattccctcctgttaagcaggacttcgcgtttgttgctccttcttctttgactgct
cacgatttaaaggaagctattgttaaagcttctggtgatttgcttgagtctgtagagttg
ttcgatgtttatgaaggcgaacaacttggagaagggctaagatctcttgcttattctgta
acatttagggcttctgatagaacgctttctagcgatgatatggaagcggtccgagaggct
attacaaagtctgctcaaaaattgcatgcaacattgcgagtataa
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