Gardnerella vaginalis HMP9231: HMPREF9231_0966
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Entry
HMPREF9231_0966 CDS
T01939
Symbol
pheS
Name
(GenBank) phenylalanine--tRNA ligase, alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF9231_0966 (pheS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gvh01007
]
HMPREF9231_0966 (pheS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gvh03016
]
HMPREF9231_0966 (pheS)
Enzymes [BR:
gvh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HMPREF9231_0966 (pheS)
Amino acid related enzymes [BR:
gvh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HMPREF9231_0966 (pheS)
Transfer RNA biogenesis [BR:
gvh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF9231_0966 (pheS)
Prokaryotic type
HMPREF9231_0966 (pheS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
ArAE_1_C
tRNA_synthFbeta
PEX14-like_2nd
Motif
Other DBs
NCBI-ProteinID:
AEF31949
LinkDB
All DBs
Position
complement(1159994..1161061)
Genome browser
AA seq
355 aa
AA seq
DB search
MASSKPFDSKAITKVVKEGIACVQAAKTMEELKAAKTKYAGAQSAMTLASKSIGSLQVEE
KKEAGKIMSALRADFGREFAAAQERIKAIEEANMLQKETVDMTLPINRKPLGARHPIARI
IEDFEDFFVSMGWQISAGPEVETEWFDFDALNFGPDHPARQMQDTFYVQGNQAKDAAGFV
GSNMVLRTQTSSDQVRALIERGVPLYIASPGRVFRTDELDATHTPVFHQCEALAVDKHLS
MADLKGVLDRLAVAMFGPDAKSRLRPSYFPFTEPSAELDLWFPDKKGGSGWIEWGGCGMV
NPNVLKSAGLDPDVYTGFAFGVGLERTLLLRHDINDMHDLVEGDKRFSEQFVMGE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagtagtaagccgttcgactcgaaggcaattacaaaggtagtaaaagagggtata
gcttgtgttcaagccgctaaaacaatggaagagttgaaagcggcaaaaactaagtatgca
ggagctcagtctgcaatgacccttgccagcaagtctattggaagtcttcaagtagaagaa
aagaaagaagctggcaagataatgtcggctttacgcgctgattttggtcgtgaatttgca
gcagcccaagagcgtattaaggctattgaagaagctaatatgcttcaaaaagaaacagtc
gatatgaccttgccaataaatcgtaagccgcttggcgctcgccatccgattgcgcgtatt
attgaagactttgaagacttctttgtgtctatgggttggcagatttctgcaggaccagag
gtagaaacagagtggttcgattttgacgcgttgaattttggtccagatcatcctgctcgt
caaatgcaagatactttttatgtgcaaggtaatcaggcaaaggatgctgcaggatttgtt
ggatctaacatggttttgcgtacgcaaacttcttccgatcaggttcgtgcgttaattgag
cgaggagtacctctgtatattgcgtccccaggccgagtattccgcacggatgagcttgat
gcaacgcatactccagtcttccaccagtgcgaagctttggcagtagataaacatttgagc
atggctgatttaaagggtgttcttgatcgacttgctgttgcaatgtttggtccagatgca
aaaagccgtttgcgcccaagctacttcccgttcacggagcctagtgcggagttggatctt
tggttcccagataagaagggtggctcaggttggattgaatggggcggatgcggaatggtg
aatccgaatgttcttaagtctgcaggcttagacccagatgtttatacgggatttgctttc
ggtgttggcttggagcgcactttgctgcttcgtcacgatattaacgatatgcacgatttg
gttgaaggcgataagcgcttcagtgaacagtttgtgatgggagagtag
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