Gardnerella vaginalis HMP9231: HMPREF9231_0984
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Entry
HMPREF9231_0984 CDS
T01939
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00500
Starch and sucrose metabolism
gvh01100
Metabolic pathways
gvh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF9231_0984 (glgX)
Enzymes [BR:
gvh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
HMPREF9231_0984 (glgX)
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Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
pulA_all-beta
Cellulase
Motif
Other DBs
NCBI-ProteinID:
AEF30917
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Position
complement(1182258..1184396)
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AA seq
712 aa
AA seq
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MQIRPGSMYPLGATYDGAGVNFALFSEVAKHVELCLFDEQDNETRIDMTEQNSYVWHTYI
SGIQPGQRYGYRVHGPYDPNHGLWCNPNKLLLDPYAKAIEGNIDGDESLFSYWFANPDDL
AAMNTLDSADHTMKAAVINPYFDWGNDQHPMIPYHDSVIYEAHVRGMTNLNRNVPPEIRG
TYAGLAHPSVISYLKKLGITAIELMPIHQFVNDSFLQNKGLSNYWGYNTIGFFAPQNSYS
SSGQRGEQVNEFKAMVKAYHAAGMEVILDVVYNHTAEGNDRGPTLSFRGIDNRAYYRLVD
NDQRHYFDTTGTGNSLLMRSPKALRLITDSLRYWVTEMHVDGFRFDLAATLARQFQEVDK
LSAFFDIIEQDPIISSVKLIAEPWDIGVGGYQVGGFPPSWSEWNGRYRDCVRDFWRSQPS
TLPEFASRLMGSSDLYEQNGRKPVASVNFITAHDGFTMNDLVSYNEKHNEANKEGNNDGA
NDNRSWNCGVEGPTNIHDVNELRQRQMRNLFSTLLMSQGIPMICAGDEIMRTQNGNNNAY
CQDNAISWINWDFNSTQKDMFDFVSKLIHLRLDHPVLHRRRFFTGREPGDDVSEIPQVEW
FDHTGSVMDMEAWSNTHALSVMIYLNGSDIPETDWYGSRMVDNDFLLIFNAHYEPITFTL
PDKNYGEKWTLVVDTHNPKGPQLHYESGFNIVAQSRSFLLLMSENQEENNLA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattagaccaggttctatgtatccgcttggagctacctacgacggtgcaggcgtg
aacttcgcattgttctctgaggtggcaaagcatgttgagctatgcttgttcgatgagcaa
gacaatgagactcgcatcgatatgaccgagcagaattcttacgtttggcatacttacata
tctggaatacagccagggcagagatacggttatcgtgtgcatggaccgtatgatccaaat
catggattatggtgtaatccaaacaaacttcttttggacccttatgcaaaggcaatagaa
ggcaatattgacggtgacgaaagcctattttcgtattggtttgctaatccagatgattta
gccgcaatgaacactttggattctgcagatcacactatgaaagcagctgttattaaccca
tattttgattggggtaacgaccagcatccaatgattccgtaccacgatagcgtgatttac
gaggctcatgttagaggaatgacgaatttaaatcgtaatgttcctccagaaattcgtgga
acatacgcaggtttagctcatccaagtgtaatatcttacttaaaaaagcttggtattact
gctattgagcttatgcctatccaccagtttgtaaatgattctttcttgcaaaataaggga
ttaagcaattattggggatataacaccattggattctttgctcctcagaattcgtactcg
agttctggacaacgtggcgagcaagttaacgaattcaaggcaatggttaaggcgtaccat
gctgcaggaatggaagttattctagacgttgtttacaaccataccgctgaaggaaacgat
agaggtccaaccttaagcttccgcggaatcgacaatcgcgcatactatcgtcttgtagat
aacgatcagagacattacttcgatactactggtactggaaattcgcttcttatgcgttct
cctaaagcattgcgactaatcacagacagcttgcgctattgggtaactgaaatgcacgta
gacggattccgatttgacttggcggcaacgcttgctcgtcaattccaagaagtagataag
ctttctgcattcttcgacattattgagcaagaccctattatttctagcgtaaaacttatt
gcagagccttgggatattggcgtaggaggatatcaagttggaggattccctccaagttgg
tccgagtggaatggtcgctaccgcgattgcgtacgcgatttttggcgctcgcagccttcg
actttgcctgaatttgcaagccgacttatgggaagctccgatttatatgagcaaaatgga
cgtaagcctgtagcttctgtaaactttattaccgctcacgatggttttactatgaacgat
ttggtgagctataacgaaaagcataatgaagcgaataaagaaggtaataacgacggtgct
aacgataatcgttcgtggaattgtggagtagaaggtcctactaatattcacgatgttaac
gaacttcgtcaacgtcaaatgcgaaacctgttctcaactttgttgatgagccagggcatt
cctatgatttgcgctggtgacgagattatgcgtactcaaaatggaaacaacaacgcatat
tgccaagataatgctatttcttggattaattgggattttaattccacacaaaaagatatg
tttgattttgtttctaagcttattcatttaagactagatcatcctgttcttcacaggcgt
agattctttactggtcgagaaccaggggatgatgtttcagagattccacaagtagaatgg
tttgatcatactggttctgttatggatatggaggcatggagtaatactcatgctctttcg
gtaatgatttatttgaatggttcagatattccagaaaccgattggtatggaagcagaatg
gtagataatgacttccttcttattttcaatgcgcattatgagcctataacatttactttg
ccagataagaattatggtgaaaagtggactcttgttgtggacactcataatccaaaagga
ccgcaattgcattatgaatcaggattcaatattgttgctcaatcacgaagtttccttctg
cttatgagtgaaaatcaagaagaaaataatctagcataa
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