Gardnerella vaginalis HMP9231: HMPREF9231_1012
Help
Entry
HMPREF9231_1012 CDS
T01939
Name
(GenBank) NlpC/P60 family protein
KO
K21471
peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gvh01002
]
HMPREF9231_1012
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gvh01011
]
HMPREF9231_1012
Peptidases and inhibitors [BR:
gvh01002
]
Cysteine peptidases
Family C40
HMPREF9231_1012
Peptidoglycan biosynthesis and degradation proteins [BR:
gvh01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
HMPREF9231_1012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
SPESP1
Motif
Other DBs
NCBI-ProteinID:
AEF31938
LinkDB
All DBs
Position
complement(1214925..1215665)
Genome browser
AA seq
246 aa
AA seq
DB search
MMIKRDKIFSSVFAGFVSAALVAAMIPLACASASAEESAVTSTRSFPKITDVKRDLFTES
TSTDVDANSHWGSIESLDVPQTKSAAELALEQARQQQQAQNNSADGFDATASRSRARNGV
GPMTYFVAPPDNQSVSAMLNFAAQFLGKVPYRSGGTSPAGWDCSGFVQYVFANMGISLPR
TSGAQATVGTAVPSLAQAQPGDIIANGAHASIYVGNGMVINSQYAGTQYDPIRYVFSGSY
SIRRIF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgatgattaagcgagataagattttttcttctgtatttgcaggttttgtatctgcagcg
ctggttgctgctatgatcccgcttgcttgtgcttccgcttctgctgaagaatcagcagtt
acatctacacgttctttccctaagattactgatgttaagcgtgatttgtttacagaatcc
acttctaccgatgttgatgctaattctcattggggcagtattgagtctttggatgttccg
cagactaagagtgctgctgaacttgcacttgaacaggctcgccagcaacaacaggcacag
aataattctgctgatggcttcgacgctactgcaagtcgttctagagcgcgtaatggcgtt
ggacctatgacgtactttgttgctcctccagataatcagtctgtttcggcgatgcttaat
tttgcggctcagtttttaggtaaagtgccttatcgttctggtggtacaagtcctgctggc
tgggattgctctggttttgtgcagtacgtttttgccaatatgggtatttctttacctaga
acttctggagctcaggccactgtaggtacggctgttccgagtttagctcaggcccagcct
ggtgacataattgccaatggtgctcatgcatctatttatgttggtaatggaatggttatt
aattctcagtacgctggaactcagtatgatcctattagatacgttttttcgggatcttat
tctattcgtagaatcttctga
DBGET
integrated database retrieval system
