Gardnerella vaginalis HMP9231: HMPREF9231_1043
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Entry
HMPREF9231_1043 CDS
T01939
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF9231_1043 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gvh01007
]
HMPREF9231_1043 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gvh03016
]
HMPREF9231_1043 (glyS)
03029 Mitochondrial biogenesis [BR:
gvh03029
]
HMPREF9231_1043 (glyS)
Enzymes [BR:
gvh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
HMPREF9231_1043 (glyS)
Amino acid related enzymes [BR:
gvh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HMPREF9231_1043 (glyS)
Transfer RNA biogenesis [BR:
gvh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF9231_1043 (glyS)
Mitochondrial biogenesis [BR:
gvh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HMPREF9231_1043 (glyS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AEF31028
LinkDB
All DBs
Position
complement(1251938..1253458)
Genome browser
AA seq
506 aa
AA seq
DB search
MAVSKLDEVVSLAKRRGFVFPAGEIYGGTRSAWDYGPLGVALKDNIKREWWRYMVTTRGD
VVGVDTSVILPSQVWVASGHVSVFNDPLIECLNCHKRHRADKLEESYAEKHGDKMPENGL
KDIACPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLRPETAQGIFVDFKNVMTATR
QKPPFGIANIGKSFRNEITPGNFIFRTREFEQMEMEFFVEPGTDEAWHQYWIDTRVNWYV
DLGVKPENLRMYEHPKEKLSHYSKRTVDIEYKFGFQGSDWGELEGIANRTDYDLSAHAKH
SGEDLSYFNQATGEKYVPYVIEPAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLD
PRLAPVKAAVLPLSKKPELQAVAQDLAADLRQHDWVIDYDESGAIGRRYRREDEIGTPLC
VTVDFDTLEDHAVTIRERDTMQQERVSLDKVADYVAIRINEKRVKYPQGPVEIVGTRAAD
GGVDVSKENGVDESQPVKIAQAGGLY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtttcaaagcttgatgaagtcgtatccttggctaagcgtcgaggatttgtgttc
ccagctggcgagatttatggtggtacgcgttctgcttgggattatggtcctttgggcgtt
gcgttaaaagacaatattaagcgcgaatggtggcgttatatggtcactacgcgtggcgat
gttgttggagtggatacttctgttattttgccttcccaagtttgggttgcgtctggtcac
gtttctgtgttcaatgatcctttgattgagtgcttgaattgccataagcgtcatcgtgca
gataagctcgaagaatcctatgccgaaaagcacggcgacaaaatgccagaaaatggcttg
aaagacattgcttgcccagattgcggcactcgcggaaactggacggagcctcgcgatttc
aacatgatgcttcgcacgcatttaggaccagttgaagacgaaaacagcttgcactacttg
cgcccagaaacagctcaaggcatttttgttgactttaagaacgttatgactgctacacgc
caaaagccaccatttggcattgcgaatattggtaagtctttccgtaatgaaatcactcct
ggaaacttcatcttccgcactcgcgagtttgagcaaatggaaatggagttcttcgtagag
cctggaacagacgaagcttggcatcaatattggattgatacacgcgtaaattggtatgtt
gatttgggtgtaaagcctgaaaatttgcgtatgtatgagcatcctaaagagaagttaagc
cattattccaagcgcactgtagatattgaatacaaattcggcttccaaggatctgactgg
ggagagcttgaaggtattgcaaaccgtaccgactacgatttgtctgctcacgctaagcat
tctggcgaggatttgagctacttcaatcaggctactggcgaaaagtatgtgccttacgtt
attgagcctgctgctggtcttacgcgttcgcttatggcattcttggttgatgcttacgac
gttgacgaagctccaaacactaagggcggagttgacaagcgtactgttcttagacttgac
cctcgcttggctcctgttaaagctgcagttttgcctttgagcaagaagccagaattgcag
gctgttgctcaagatttggctgcggatttgcgccagcacgattgggttattgattacgat
gagtctggtgctattggtcgccgctatcgtcgtgaggatgaaattggtactcctttgtgt
gtaacagttgattttgatactttggaagatcatgctgtaacgatccgcgagcgcgacact
atgcaacaagagcgcgtttccttagacaaggttgcagattacgtagcaatccgcattaac
gaaaagcgcgttaagtatccgcaaggtcctgtagagattgttggtactcgcgctgcagat
ggtggtgtggatgtttctaaagaaaacggtgttgatgaatcgcagcctgtaaagattgct
caggctggcggcttgtattaa
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