Gardnerella vaginalis HMP9231: HMPREF9231_1087
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Entry
HMPREF9231_1087 CDS
T01939
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00300
Lysine biosynthesis
gvh00550
Peptidoglycan biosynthesis
gvh01100
Metabolic pathways
gvh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMPREF9231_1087 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF9231_1087 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF9231_1087 (murF)
Enzymes [BR:
gvh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
HMPREF9231_1087 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CoV_S1
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEF31549
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Position
complement(1312638..1314368)
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AA seq
576 aa
AA seq
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MQNKTLGNNTTTNNMRMMPMSVKEVAAAVNGRLFIGGCLVKENHSITSEKFCITDNDVVI
SDNDVVIYATSDSRKVVDSSIFVAIPGDRVDGHDFVQKAAELGAKIAIVEHFVKLDESNN
SKIAQIVVENSVEALGLLAKHNLERRRALNTPFSIIGITGSVGKTTTKDMLKALLSTLGN
TVAPIGSFNNEIGLPLTSLQVNENTRFLIAEMGANHVGEIAKLTTIAPPDLAVVLKVGVA
HLGEFGSVERIAQAKSEIVRGLVAHGIAILNADDFRVSAMRSLADQDKLRWFGKNSNTEG
DFDASNNGNYQLSASDISLDEMGCAEFVLNEKNEDKSKNSVRVHLAIQGQHNVMNAMAAS
NVARYFGMNLDSIAKVLHEVSHISPHRMQLSKISNNNNVFTLIDDSFNANPDSMKAGIDG
LCSYENHDLHDLNVNTEEDLTSKKNNIFRIAVLGSMLELGSNENNMHESIGEYVAKHNID
ALIAVGSKFDKKLDELAGCIYKGAKDNWQNKSLDVENGVYFVHDCTEADNVVWNLVAAHS
SSVVLLKGSHASGLSVLAERWSKLNESLSEHTEVNL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataagactttgggcaataatacaacgaccaataatatgcgtatgatgcctatg
agtgttaaagaagtagctgctgcggttaatggcagactttttataggtggttgtttagta
aaagaaaaccatagtattacttctgagaaattttgcataacagataatgatgttgttatt
tcagataatgatgttgttatttatgcaacaagtgattctcgtaaagttgtggattcttcc
atatttgtagcaataccaggcgatcgtgttgatggtcatgattttgttcaaaaagctgca
gaacttggtgcaaaaattgcaatagtggagcattttgtaaagttagatgagtctaataat
agtaaaattgctcaaatagttgttgaaaattcggttgaagctcttggacttttagcaaaa
cacaatcttgagcgtcgccgcgcgttaaatacaccgtttagtattatcggaataactggt
tcagtaggaaaaaccactacaaaagatatgctcaaggctcttctttcaacgctcggtaac
actgttgcgccaattggatcttttaataatgaaattggtttgccgttaacatctttgcaa
gtaaatgaaaacacgagattccttattgcagaaatgggagcaaatcatgttggcgaaatc
gcaaaactaaccacaatagctcctcctgatttagctgttgtattgaaggttggtgttgcg
catttaggtgagtttggttctgtagaaagaattgctcaggcaaaaagtgagattgttaga
ggtcttgttgcacacggaatagcaattttaaatgctgatgattttcgagtatctgcaatg
cgttctttagctgatcaagataaattgcgttggtttggtaaaaacagcaatacggaaggt
gattttgacgcatctaacaatggcaattaccaattgtctgcaagtgatatttcattagat
gaaatgggttgtgcagaatttgttcttaatgagaagaatgaggataagtctaaaaactca
gttagagtccatcttgctatacagggacagcataatgttatgaatgcaatggctgcttct
aatgtggcaagatattttggaatgaatcttgatagtattgctaaagttttgcatgaagtt
tcgcatattagtccgcatagaatgcagctttctaaaatttctaacaataataatgttttt
acgcttattgacgattcattcaatgcaaatcctgattccatgaaggctggaattgatgga
ttgtgttcttatgaaaatcatgacttacatgatttaaacgttaatactgaagaagatcta
acaagtaaaaagaataatatttttagaatagcagttcttggatctatgttagagcttggt
tctaatgagaataatatgcatgaatcaataggcgaatatgttgcaaagcataatattgat
gcactaatagctgttggttctaaatttgataaaaaattagatgaactagctggttgcatt
tataaaggtgctaaagataattggcagaataagagccttgatgttgaaaatggcgtatat
tttgttcatgattgcactgaggcggataacgttgtgtggaatcttgtggccgcgcattcg
agtagtgttgtgttattgaaagggtctcatgcttcgggcttgagcgtgttagctgaacgc
tggtctaaacttaatgagagtcttagtgaacatacggaggttaacctgtga
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