Gardnerella vaginalis HMP9231: HMPREF9231_1129
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Entry
HMPREF9231_1129 CDS
T01939
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9231_1129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_1129
Transporters [BR:
gvh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HMPREF9231_1129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
AAA_16
DUF87
nSTAND1
AAA_29
AAA_21
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEF31783
LinkDB
All DBs
Position
complement(1369809..1371659)
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AA seq
616 aa
AA seq
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MAGNLKDNSRKIKNNPPCALRTILSSLKKYRFLGVLTAVTILVEAAMQIEIPTVMSNLID
FGIMSRSQEAVQYYGLQLLIFAAIAMIAGVVSGICCAHSSAGFGKNLRHNMFSRLQSLSF
SDLDKFSSGTVVTRMTSDVSNVQFAYQMIIRSGIRSVMIIITAWWFTFSISPAISWVFLS
FVPIIGAIGAVGASIVAPAFSRIYRMIDEMNNRVGENLHNIRVVKSYVRSDYEISRFTRI
SHKIYDYFIKAEYVLNCSIPLFNLCFYSGMLLIAWLASYEIVASGNNPAFGLTTGNLAAL
VVYALQILFALANLVAVFVMSLTARASMHRISHVLQSRNTEVVSKHPLTKLSDASVRFEN
VSLRYPQSDNTDESTPAEQEILHDINISIPSGATVGVVGATGSGKSSLVQLIARLYDVTS
GALFVGGKDIRDYDSSSLREEVGVVLQKNILFSGTIAENLRWGRAEASDNDLRQACEIAC
ADEFIKDLPDGYNTHIDQGGKNVSGGQRQRLCIARALLRKPKILILDDSMSAVDMKTDSK
IRDGLKKFMPDSTQIIVAQRISSIEHADIIVVLKDGRVVANGSHDELFKSCEIYRNMVVS
QEKSRITSATKEEGAK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaatttgaaggacaattcgcgaaaaattaaaaataatcctccttgtgcattg
cgtacgattctatcatctttaaaaaagtaccgttttcttggcgttttaacagctgttact
attctcgttgaagctgctatgcaaattgagatccctacagtaatgtcaaatcttattgat
tttggtattatgtcacgttctcaagaagctgtgcaatattatggtttgcaattgcttatt
tttgctgcaattgcaatgattgcaggcgttgtttctggtatttgttgcgctcattctagt
gctggttttggtaaaaatttacgtcacaacatgttttcacgcttacaaagtttaagtttt
tctgatttagataagttttctagcggtactgttgttacgcgtatgactagtgatgtgtca
aatgtgcaatttgcttaccaaatgattattcgctctggtattcgcagcgttatgattatc
atcactgcttggtggtttactttttcaattagccctgctatctcgtgggtttttctttca
tttgtgcctattattggtgcaattggcgctgttggagctagtatagttgctccagcattt
tctcgaatttatcgaatgattgacgagatgaataatagagttggcgagaatttgcataat
attcgcgtcgtaaagtcttatgtgcgttctgattatgaaataagtcgttttacgcgtatt
tcacataaaatctatgattattttattaaagctgagtatgtgttaaattgtagtattcct
ttgtttaacttatgtttttattctggcatgctacttattgcgtggttggcttcgtacgaa
attgtggcttcaggaaataatcctgcttttggtttaacaacgggaaatcttgctgcatta
gtagtgtatgctttgcaaattttgtttgctttagcgaatttagttgcagtgtttgtaatg
tcgttaacagctcgagcttcgatgcatcgtatttcacatgttttgcaatctcgaaatact
gaagttgtttccaagcatccacttacaaagctttctgacgcttctgtgcgttttgaaaat
gtttcgttacgctatcctcaatcagataatacagatgaatccactccagcagaacaggaa
attttacatgatataaatatatctattccttctggagcaactgttggagttgttggtgca
acgggatctggaaaatcaagtttagtgcaattaattgcaagactttatgacgtaacttct
ggtgctctttttgtaggcggaaaagatattcgcgattatgattcttctagtttgcgtgaa
gaagttggtgttgttctacaaaaaaatattttgtttagtggcacaattgcagaaaatctt
cgctggggtagggcggaagcaagcgataatgatttgcgtcaagcttgcgaaattgcttgt
gctgatgagtttattaaagatttaccagacggctacaatacgcatattgaccagggtggt
aagaatgtttccggtggtcagcgacagcgtttgtgcattgcgcgcgcacttttgaggaag
ccgaaaattttaatcctcgacgactcgatgagtgcggttgatatgaaaacggatagtaaa
attcgcgatggcttgaaaaagtttatgcctgattctacgcaaattatcgttgctcagcgc
atatcttcaatcgaacatgcggatattattgttgttcttaaagatggtcgtgttgttgct
aacggttcgcatgatgaattatttaaatcttgtgaaatttacagaaatatggtggtttct
caagaaaaaagtcgaataactagcgcaactaaagaagaaggagctaaataa
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