Gardnerella vaginalis HMP9231: HMPREF9231_1145
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Entry
HMPREF9231_1145 CDS
T01939
Name
(GenBank) glycosyltransferase, group 2 family protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9231_1145
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gvh01005
]
HMPREF9231_1145
Lipopolysaccharide biosynthesis proteins [BR:
gvh01005
]
O-antigen repeat unit
HMPREF9231_1145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
RepB_primase_C
Glyco_transf_21
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AEF31598
LinkDB
All DBs
Position
complement(1388336..1389217)
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AA seq
293 aa
AA seq
DB search
MRICSGIITYNPTLTDVSTCLEALCNQVERVIIVDNASKNVKSLQEVVSKYANVTLVKNS
QNIGFAKALTQVFEWAKSQGFNWVLTLNDDSVVPSNMISEYKKILENQGSLVNQKNSKNS
KIAIVCSLLKNRLDGTILHSKCHEDECITSGSLTSVEAWQKIGGFDEWLEIDGVDFDFSR
RLARAGWQIVECQNVIMEHQIGKARSINLIIKHPIVWNHNANRKYYIARNMQVVDYKMGT
YSYAKSLRAVVRDMIFVALWEKNKFAKIRAMIRGFKDGQQKIRQMRKAEQNAV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttgttctggaataatcacctataatccaactttaacagacgtaagcacgtgt
ttagaagcgctatgcaatcaagtagagcgcgtaataatcgtagacaatgcgtctaaaaat
gttaaaagtttgcaagaagttgtaagcaaatacgcaaacgtgactttagttaaaaacagt
caaaatattggttttgcaaaagcattaacgcaagtgtttgaatgggcaaaatcgcaaggt
ttcaactgggttctaacgcttaacgacgattctgttgtgccaagcaacatgattagcgaa
tacaagaaaatcctggaaaatcagggaagtcttgtaaatcaaaaaaattcaaaaaattcc
aaaatcgcaattgtatgctctttgctaaaaaaccgtttagacggcacgattttacacagc
aaatgccacgaagacgaatgcataacgtctggaagcttaacaagcgtagaagcgtggcag
aaaatcggcggatttgacgaatggctagaaatcgacggagtagacttcgacttttcaagg
cgacttgcgcgtgctggctggcaaatcgtagagtgccaaaacgttataatggaacaccaa
atcggcaaagcgcgctcaataaacttgattataaaacacccaatcgtgtggaatcacaat
gcaaatcgcaagtactatatagcgcgaaatatgcaagtagtggattacaaaatgggaaca
tactcgtatgctaagtcgttgcgtgcagttgtgcgagatatgattttcgttgcgctgtgg
gaaaagaataaatttgcgaaaattcgcgcgatgatacgcggatttaaggatgggcagcaa
aagattcgtcaaatgcgcaaagcagaacagaacgcggtttga
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