KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_1156
Entry
HMPREF9231_1156   CDS       T01939                                 
Name
(GenBank) putative dTDP-4-dehydrorhamnose reductase
  KO
K23987  dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
Organism
gvh  Gardnerella vaginalis HMP9231
Pathway
gvh00521  Streptomycin biosynthesis
gvh00523  Polyketide sugar unit biosynthesis
gvh00541  Biosynthesis of various nucleotide sugars
gvh01100  Metabolic pathways
gvh01110  Biosynthesis of secondary metabolites
gvh01250  Biosynthesis of nucleotide sugars
Module
gvh_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    HMPREF9231_1156
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    HMPREF9231_1156
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    HMPREF9231_1156
Enzymes [BR:gvh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     HMPREF9231_1156
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     HMPREF9231_1156
SSDB
Motif
Pfam: RmlD_sub_bind dTDP_sugar_isom Epimerase GDP_Man_Dehyd NAD_binding_4 DUF6252 Polysacc_synt_2
Other DBs
NCBI-ProteinID: AEF31237
LinkDB
Position
1400578..1402020
AA seq 480 aa
MEFEKELSVTKTNIPGLIVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNE
KRGVTRGIHAEPWDKYISIATGEVFGAWVDLRPGKSFGQVYTTTLNPSKAIYVPRGVGNS
FQALQDGTAYTYLVNAHWSLEQKKTYTFVNLADPDLHINWPIPLEESERSEADLHHPMLK
NAKPMAPKRTLVTGCNGQLGRAIQNYAKENNLEGFEYVDLDSFDIANKDDYSRYDWDLYG
TIINTAAYTSVDGAQTLQGRRAAWNSNVKGVANLAKIAQEHHITLVHISSDYVFDGTQEN
HKENEDFAPLGVYGETKAAADSLVANVPQHYIIRSSWIVGEGRNFVTRMIDFANRLKNGE
SVSVQAPIDQTGRLTFASDLVKGMFHLLNTQAQYGTYNLTGSGKIASWHDIAQKVFTQLN
VDTSKIEANRVDDYTRISNGSPRPHKCALDLQKIESAGFTPCDWEDLLESYVNRIEQNNK
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggaatttgaaaaagaactaagcgttacaaaaaccaatattccaggtttaatcgtattt
gatcttccagtacacggagataaccgcggatggttcaaagaaaactggcagcgcgcaaaa
atgacggctctaggtctccccgactttggacccgtacaaaacaacatttcgttcaacgaa
aaacgcggagtaaccagaggcatccacgcagagccatgggataaatacataagcattgct
actggcgaagtatttggcgcatgggtggatttaagaccaggtaaaagcttcggtcaagtg
tacacaaccacactaaaccctagcaaagcaatctacgttcctagaggcgtaggaaacagc
ttccaagctttgcaagatggcacggcatacacttatttagtaaacgcacattggtcacta
gagcaaaagaaaacatacacttttgtaaaccttgcagacccagatttacacattaattgg
ccaatacctttagaagaatccgagcgcagcgaagctgacttacaccacccaatgctaaaa
aacgcaaagccaatggcaccaaaacgcactcttgtaactggatgcaacggtcaacttggt
cgcgcaatacaaaattatgctaaagagaataatttagaaggatttgagtacgtagactta
gatagcttcgatatagcaaataaagacgattacagccgctacgactgggatttgtacgga
acgattattaacacagcagcatacacgtctgtagatggcgcgcaaacgctacaagggcga
agagccgcgtggaatagcaacgttaaaggagtggcaaatcttgcaaaaatagcgcaagaa
caccacattactcttgtgcacatctcaagcgactatgtttttgacggtactcaagaaaat
cacaaagaaaacgaagactttgcaccactaggcgtgtacggcgaaacaaaagctgcagca
gattctctagtagccaacgttccacagcattatattattcgctcaagctggattgtcgga
gaaggacgaaactttgtaacgcgcatgattgactttgcaaaccgtttaaaaaatggcgaa
tctgttagtgttcaagcaccaatagatcaaactggcagactcacttttgcaagcgactta
gtaaaaggcatgttccatcttctaaacactcaagcacaatacggaacatacaatcttaca
ggttcaggaaaaatcgcgtcttggcacgatattgctcaaaaagtgtttacacaacttaat
gtagacacaagcaaaatcgaagcaaatcgcgtagacgattacacgcgcatatctaatggc
tctcctagaccacacaagtgcgcacttgacttacaaaaaatcgaatccgctggatttacg
ccatgcgattgggaagatttgcttgaatcttacgtaaatagaattgaacaaaacaacaag
taa

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