Gardnerella vaginalis HMP9231: HMPREF9231_1163
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Entry
HMPREF9231_1163 CDS
T01939
Name
(GenBank) cyclic nucleotide-binding domain protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02020
Two-component system
gvh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMPREF9231_1163
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9231_1163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gvh03000
]
HMPREF9231_1163
Transcription factors [BR:
gvh03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
HMPREF9231_1163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
HVO_A0261_N
GntR
Crp
MarR_2
HTH_24
HTH_3
MarR
Xre-like-HTH
TrmB
HTH_29
HTH_ParB
Sigma70_r4
DUF977
YfeC-like
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
AEF31230
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All DBs
Position
complement(1410548..1411267)
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AA seq
239 aa
AA seq
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MVRIKPDKPYTEDLPLTHTALFKQVPLDQARELLEHLHESVFSKGQAIFNEGDTDRRMYL
LERGRVKLVRHSRDNRVQLLSIHTHGEILGEIPVFDPFGGPRTASAIAITDRTRVLWLEN
EVLFKWLGHHPRVAVDMLQVLAARLRANNEHISDLVFMDVPARLAKTLLNLASRFGEPVR
EGVLVPHDLTQEELAQLVGSSRETVNKALMDFAQRGWIKRHGRSIIIYQPGMLIRRAER
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtggtaagaattaagccagataagccctacacggaagaccttcctttaacgcatacagcg
ttatttaagcaagtgccactcgatcaagcgagggagcttctcgagcatttgcatgagtcg
gttttttctaaggggcaggcgatttttaacgaaggagatactgatcgccgcatgtatctg
cttgagcgtggacgggttaagcttgtacgccattcaagggataatcgtgtgcaattgctt
agtatccacacgcacggtgagattcttggagagattcctgtttttgacccgttcggcggt
ccgcgtacagcttctgcaatagcaattacagatagaactcgcgtattatggctagaaaac
gaagttctttttaagtggcttggccatcatcctagggttgctgtagacatgcttcaggtt
ttagctgcacgtttaagagcaaataatgaacatatttctgatcttgtttttatggacgtt
ccagctagattggctaaaacgcttttaaaccttgcttctaggtttggagaacctgttagg
gaaggtgtgcttgttcctcacgatttaacacaagaagaacttgctcaacttgttgggtct
tctagagaaacagttaataaagcgttgatggattttgctcagaggggttggattaaaagg
cacggtaggtcaattattatttaccaacctggaatgttgattcgcagagcagaaagataa
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