Gardnerella vaginalis HMP9231: HMPREF9231_1265
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Entry
HMPREF9231_1265 CDS
T01939
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9231_1265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_1265
Transporters [BR:
gvh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HMPREF9231_1265
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_25
AAA_22
AAA
AAA_21
AAA_30
TsaE
SbcC_Walker_B
RsgA_GTPase
Zeta_toxin
AAA_7
AAA_18
AAA_29
AAA_5
DEAD
SRP54
AAA_28
AAA_24
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AEF30922
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All DBs
Position
complement(1537757..1539553)
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AA seq
598 aa
AA seq
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MVQRNTYREDESQEEHVNLHELMRVRKYIKPYAWQLVKIVLVVISGSCIMTITPMITKTL
IDVVLPNKNVSYLYALIALFGVLIVLYELGLAYRTLAITRLGQMIIKDMRRDIFTHVQSL
SFDYFDSRPHGKILIRIVNYINTLSDTLSSGLINVFSDVFVLIITLIAMFAMDWRMALWS
LVLFPVFIIWTRTLQILQRKASKKLSNKQSNLNAYLHESIAGVKTTQTFARESEQYATFQ
EQQSGVRKAWMQNVRVQMLLWPGASIIESAAISLLYYVGITNASSMNISTGTLIAFVWYS
STFWEPVVNIGNFYTQLITCSVYLERIFETLSIKPNIVDKSDAKELPQIKGRVDVNDVVF
RYEESGKPILNLIDLHIEPGTTVALVGPTGAGKTTLVSLLSRFYDVSEGSITIDGYDVRS
ITLASLRKQMGVMLQDSFIFSGTVKENIRYGKLDATDEEIEAAARVVHAHEFIEELPNGY
DTEIEERGATLSAGQRQLISFSRVLLANPRILILDEATSNIDTRTEEALQAGLAQLLKNR
TSFVIAHRLSTIENADLICVIDHGQIVERGSHEQLMAQKGAYYRLVESQYAAISAAIQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcgcaacacttatagagaagacgaaagccaagaagagcacgtaaatttacac
gagttgatgcgcgttcgcaaatacataaagccgtacgcatggcagctagtcaaaatagtt
ttagttgttattagcggaagttgcattatgacaataacgccaatgattacaaaaacactt
atagacgtagttttgcctaataaaaacgtttcttatttgtatgcgcttattgcattgttt
ggcgtgcttattgtgctatatgagcttggtttggcatacagaacgcttgcaattacgcga
cttggtcaaatgataattaaagatatgcgacgagatatttttacgcacgtgcaatcgtta
tcgtttgattacttcgattcgcgcccacacggcaagattttgattcgcatagtaaactac
ataaacacgctttccgacacgctttcgtctggtttaatcaacgtgttttccgatgttttt
gtgctaatcattacactaatcgcaatgtttgctatggattggcgaatggcattgtggagt
cttgtattattcccagtttttataatctggactcgcactttgcaaattttgcaacgaaaa
gcgtctaaaaaactatcaaataagcaaagcaatcttaacgcatatttgcacgaatcaatc
gcaggcgtaaaaacaactcagacttttgcgcgcgaatcggagcaatacgctacattccaa
gagcagcagtcgggagttagaaaagcgtggatgcaaaatgttagagtgcaaatgctgctt
tggcctggagcttcgattattgaaagcgcagcaatttcgctgctctactatgttggcata
acaaacgcgagcagtatgaacataagcacgggtactcttatagcatttgtgtggtattcg
agcactttctgggagccagttgtaaacattggtaacttctacacgcaacttataacatgc
tcagtgtatttggagcgtatttttgagactctaagcattaagccaaatattgtagataag
tcagatgcaaaagaattgccgcaaattaaaggcagggttgacgtaaacgacgttgtgttc
cgctacgaagagagcggaaagccgattttgaatttaattgacttgcacattgagcctgga
acaacggttgcgcttgtaggtcctactggagcgggtaaaacaacgcttgtaagcctgctt
tctagattctacgacgtttccgaaggctcaatcacaattgacggctacgatgtgcgctca
ataacgttagcatctttgcgcaaacaaatgggcgttatgcttcaagacagctttatattt
agcggaactgttaaagaaaacattcgctacggcaagcttgacgcaacagacgaagagatt
gaagctgcagctcgcgtagttcacgctcacgagtttattgaagaattgcctaatggctac
gatacggaaattgaggagcgaggagccactctttctgcaggacaaaggcagcttatatcg
ttttccagagtattacttgcgaatccgcgaattctaattttagacgaagcaacaagcaat
atagatacgcgtacagaagaggcgttgcaagcaggattagctcaattgcttaaaaatcgc
acttcttttgtaattgcacacaggctttctacaatagagaatgcggatttgatttgcgtg
attgaccatgggcaaatcgtggagcgcggaagccatgagcagcttatggcgcaaaaaggt
gcgtattacaggcttgtggaatcgcaatacgctgcgattagtgctgcgatccagtaa
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