Gardnerella vaginalis HMP9231: HMPREF9231_1266
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Entry
HMPREF9231_1266 CDS
T01939
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9231_1266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_1266
Transporters [BR:
gvh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HMPREF9231_1266
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
ABC_membrane_3
ABC_ATPase
AAA_29
AAA_16
Zeta_toxin
nSTAND3
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AEF31504
LinkDB
All DBs
Position
complement(1539555..1541381)
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AA seq
608 aa
AA seq
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MYVNPNKRKDASNVRWVLQYCKPDMWRVGVSLVLFTINDTMAMTMPLLSGFIVDKIIIGK
QHDLLLGVCVLMVAMMIVRVGSRYIYQLLMEKFGQNAVYRLVSDEYEKLHSLDFTYFNHT
RTGDIMSRMTSDTDAIRHVLSWVSYMALDCLVMFVFALVIMFSIQWQLALALMAITPFLF
WLARLMGKNARPKFLAIRESFARMNSMVEENIEGNRVVKAFVREPFETQKFDKCNEDYFN
RNITLAKNTQKYMPWLDGMGFALELVTVGFGGWLVLNGSMTLGAFVTFNSFLWMLHMPVR
MVGWLINDWQRFNAGCVNIRKLLTQESHIDLPSTSAENLKVKGRVTFEHVDFAFPDDLDS
PILSDIDLDVPAGTKLGILGETGSGKSTLVSLIARFYDTTRGRVLIDGKDVREWPLETVR
NQVSIVAQETFLFSDTIAGNIGFGLPQNEENCKELDSTIRRMARIADADDFIMNMPEGYE
TVVGERGVGLSGGQKQRLSLARALANNPPILIMDDTTSAVDMETEEHIQKELKKLDGSRT
VITIAHRISSVKDADMIIVLDHGKIVERGTHEHLVASHGRYWEIYKKQLGMQTGKALGFE
DSHEPKVE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtaaatccaaataaacgcaaagacgcgagtaacgtgcgctgggttttgcaatat
tgtaagccagatatgtggagagtaggcgtatcgctagttctttttactataaacgacaca
atggcaatgacaatgcctctactttcgggctttattgtagacaaaataattattggcaaa
cagcatgatttacttcttggcgtatgcgtgctaatggttgcaatgatgattgttcgcgtt
ggatcaaggtatatctaccagcttctaatggaaaagtttggccaaaatgccgtgtatcgc
cttgtaagcgacgagtacgaaaagctacattctcttgattttacgtactttaatcacacg
cgcacaggcgacattatgagccgcatgacttcggatacggacgctattcgccacgtttta
agctgggtgtcttatatggcgctggattgcttagtgatgtttgtgtttgcgctagttata
atgttttcaatacaatggcagctagctctagcacttatggcaattacaccatttttattc
tggcttgcaagacttatgggcaagaacgctaggccaaagttccttgcgattcgcgaatcg
tttgcacgcatgaattcaatggtagaagaaaacattgaaggcaatcgtgttgtaaaagct
tttgtgcgcgagccttttgaaacacagaaattcgataaatgcaacgaagactactttaac
cgcaatattacgcttgcaaaaaacacacaaaaatacatgccatggcttgacggcatgggc
tttgcgttagagcttgtaacagtaggatttggtggatggcttgtgcttaatggaagcatg
actttaggtgcgtttgtaacgtttaacagcttcctttggatgctccacatgccagtaaga
atggttgggtggcttattaacgattggcagcgattcaacgcaggatgcgtaaatattcgc
aagcttcttacgcaagaatcgcatattgatttgccatctacatctgcggaaaatcttaaa
gttaaggggcgcgtaacttttgaacacgttgattttgcattcccagacgatcttgattcc
ccaattttaagtgatattgatttagatgttccagcaggcacaaagcttggaatcttaggg
gaaacggggtctggaaagtcaacgcttgtaagtcttatagcgcgtttttatgacactacg
cgcggccgcgttttaattgatggaaaagacgtgcgcgaatggcctctagaaactgttaga
aatcaagttagcatagttgcgcaagaaacattcctgttttccgatacgattgcaggaaat
attggctttggtttgcctcaaaacgaggaaaattgcaaagaattagatagcacgattagg
cgtatggcaagaatcgcagatgcagacgattttattatgaatatgccagaaggctacgaa
actgtagtaggcgagcgaggagttggtctttcgggcggccaaaagcagcgtttaagtctt
gctcgcgcgctagctaataatcctccaatcttgattatggacgatacaacttctgcagta
gacatggaaactgaggagcatattcaaaaagagctaaaaaagttagatggttctcgcaca
gtaatcacaattgctcacagaatttcgtctgttaaagacgcagacatgattattgtgcta
gatcacggcaaaatcgtagaacgcggaacgcacgagcatcttgtggcatcgcatggaaga
tattgggaaatctacaaaaagcagcttggtatgcaaacgggcaaagctttgggatttgaa
gattcacacgagcctaaggtggagtag
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