Gardnerella vaginalis HMP9231: HMPREF9231_1282
Help
Entry
HMPREF9231_1282 CDS
T01939
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh03030
DNA replication
gvh03430
Mismatch repair
gvh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF9231_1282
03430 Mismatch repair
HMPREF9231_1282
03440 Homologous recombination
HMPREF9231_1282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gvh03032
]
HMPREF9231_1282
03400 DNA repair and recombination proteins [BR:
gvh03400
]
HMPREF9231_1282
Enzymes [BR:
gvh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF9231_1282
DNA replication proteins [BR:
gvh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF9231_1282
DNA repair and recombination proteins [BR:
gvh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF9231_1282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
AEF31714
LinkDB
All DBs
Position
complement(1563166..1564356)
Genome browser
AA seq
396 aa
AA seq
DB search
MDVWESVVGQAQVVERLKKVAQGDSSKIAQSWLICGSTGFGCAKVARAFAAALQSSGKIA
SNRAAENSATQINTQINTDKIASEVLAGTSPDVNILSTDKVTVSIDEVRELVSISEQMPS
VAPWRIIIIEDVGRMLERTTNVLLKEIEEPAPRTIWILCAASAADVLPTIRSRSQIVNLA
QPSDQDVQEYVQQSAHIDAKTAANVARIAQGNVDLAMLYATSESARSRREELVAGVLRLS
SAIDAIMLAQTLIEDAKSQAEDEVQKSVEAEQSEFLRINGIKPTDKIPPKIRSAYNAIGK
KDDVKRKVTRVSRDVLNRAIDAICSVYRDVLVVLNNAQLQTPLVNQEFKAEIMQLSKKNT
AERAFKCLDALAVAKKRLAGNGNATLVFEALFCEIS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttgggaatcggtagttggtcaagcgcaagttgttgaacgccttaaaaaagta
gcgcaaggcgattcaagcaaaatcgcgcaatcatggcttatttgcggatctactggattc
gggtgtgcaaaagtggcaagagcgtttgcagcggcattgcaatcgagtggaaaaatcgca
agcaaccgcgccgccgaaaactccgccactcaaataaacactcaaataaacacagataaa
atcgcaagtgaagtattagctggaacaagcccagacgtaaacattttaagcacggacaaa
gttacagtaagcattgacgaagtgcgcgaactcgtatcaatatccgagcaaatgccaagt
gttgcaccgtggcgaatcataataatcgaagacgttgggcgcatgcttgagcgcacaaca
aacgttttgctaaaagaaatcgaagagccagcacctcgcacaatatggattctttgcgcg
gcaagcgcggcagatgttttgccaacaattcgttctaggtctcaaatagtgaatttggct
caaccaagcgaccaagatgtgcaagaatacgtgcaacaaagcgcacatattgatgcaaaa
acggcggcaaacgtggctcgcatagctcaaggaaacgttgatttagcaatgctctacgct
acaagcgagagcgctagaagcagaagagaagagcttgttgcaggcgttttgcgtcttagc
agcgcaatagatgcgattatgcttgcgcaaacgctaatcgaagatgctaaaagccaggca
gaagacgaagtgcaaaagtctgttgaagctgagcaaagcgagtttttgcgcataaatggc
attaagccaacagataaaatcccacctaaaattcgtagcgcatacaatgcgattggcaaa
aaagacgatgttaagcgcaaagtcactcgcgtaagcagagacgttttaaaccgcgcaata
gatgcgatttgcagcgtttacagagatgtgcttgttgtgctaaacaatgctcaattacaa
acaccacttgtgaatcaagaatttaaagcagaaattatgcagctttctaaaaaaaataca
gcagagcgcgcgtttaaatgcctggacgcgcttgctgtggcaaaaaagcggcttgctggc
aatggaaacgcaacgcttgtttttgaagcacttttttgcgagatttcttag
DBGET
integrated database retrieval system
