Gardnerella vaginalis HMP9231: HMPREF9231_1288
Help
Entry
HMPREF9231_1288 CDS
T01939
Name
(GenBank) transglycosylase
Organism
gvh
Gardnerella vaginalis HMP9231
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AEF31192
LinkDB
All DBs
Position
1571046..1573397
Genome browser
AA seq
783 aa
AA seq
DB search
MVANSNGQNSHSSNTGRTVRSATSAEEKRRANARTGTARPSATRQRRQRRKHKRIRDTWR
TKHPILFWALIIIFTPIILGTLVFAVMYVNTDIPQPDKIAMADKTKVYYADGKTEIGSFA
EQNREIISCSALKPYVGNAIVASENRSFYKDGGIDFKGIGRAIIHNITSKGRWGGSTITQ
QYAERYYLGETKTYLGKLHEAILALKIAQTQDKNTVLCNYMNTIYLGRGAYGIQAAAKAY
FGVEAKDLTLSQAAMLAGIIPAPSSWDPAIMPKEANMRFKRVLRIMREDKYITDAEYKSA
KMPQTINQTKQNVYSGPQGYLLNMVRSELTQSGAFTKEDLDTGGYRIVTTIDKAKQDLMF
SVASPAMGGRGIAPAGLQVGGMSVNPKDGSIISVYAGDDYLSKPLNNATQALYEPGSTMK
PFALIGAIQAGTSLNTLFNGNSNLKFEGIDKPVNNYANTNWGTINLYKATANSVNTPFMS
LQQKLGRRAVAHTAVTAGLDPKRINGENPFTVLGNDPVHVSEIARAYSTIANQGRRPDIH
IVASVKNPDGKEFYRAPTSGRQVFSPADMALTTKALQGVVQYGTSTEARGVGKPIAGKSG
TANDETACSFVGFTPSVVTVFAIWYPNAQGNPQPVPSFRGYPGGVGYSAHLFTKYMRHAL
TGMPTEKFPEAKDNGKIGGEDGKWGLGGNRRTSEYDYSDRASDDKEPYKENKDKVDRTEN
KPSDSAGAAAGDSSRGSEGSYGSGLGSGESGQAERNSSGAFDSPGSPYGYSGSETQEGAA
GGD
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaaatagtaatggacaaaattcgcactcttctaatacaggacgcactgtaaga
agcgcgacttctgcagaggaaaaacgacgcgcaaacgccagaactggaacagccagacca
agcgcaacaaggcagaggcgtcaaagaagaaaacacaaaagaatccgcgacacgtggcga
acaaaacatccaatcctattttgggcattaatcataatttttacaccaataatccttggc
acactcgtatttgcggttatgtatgtaaacaccgacattccgcagccagataagattgcg
atggcagacaaaaccaaggtgtactacgcagatggaaaaacagaaatcggtagttttgcg
gaacaaaatcgagaaatcataagttgctctgcgctaaaaccatatgttggcaacgcgata
gtcgcaagcgaaaacagatcgttctacaaagacggtggaattgattttaaaggaattgga
cgcgcaataattcacaacataacttctaaaggacgctggggcgggtccacaatcacacaa
cagtatgcagaacgctactatcttggtgaaacaaaaacgtatttaggcaagcttcacgag
gcgattctagctctaaaaatcgcgcaaacacaagataaaaatactgtgctatgtaactat
atgaacactatttatcttggtcgcggagcgtatggaatacaagcggcagcaaaagcgtac
tttggtgtagaagcaaaggatcttacactatctcaagcagcaatgctggctggaataatc
cctgcaccaagcagctgggatcctgcaattatgcctaaagaagcgaatatgcgattcaag
cgcgttcttaggattatgcgtgaagacaagtacattactgacgcagaatataaaagcgct
aaaatgccacaaaccattaatcagactaagcaaaacgtttattcaggacctcaaggttat
ttgcttaacatggttcgcagcgagcttactcaaagcggagcttttacaaaggaagacctt
gatactggcggatatcgtattgttacaacaatcgacaaagctaagcaggatttaatgttt
agtgtggcaagccctgctatgggtggtcgcggaattgctccagctggattgcaagtaggt
ggaatgagtgtaaatcctaaagacgggtcaatcatatccgtttatgctggagatgactat
ctttctaaaccgcttaataatgctactcaagccctttatgaacctggaagcaccatgaag
ccattcgctttaatcggtgctattcaggctggaacaagtcttaatacgctgtttaatgga
aattctaacctaaagtttgaaggcatagataagcctgttaacaactatgcaaacactaat
tggggaacaatcaacctttataaagcaacagcaaactccgtgaacacgccgtttatgtct
ttgcagcaaaagcttgggcgtagggctgtggctcatactgctgttacggctggcttggat
cctaagaggattaatggcgaaaatccgttcacagtgttgggtaacgaccctgtgcatgtt
agcgaaattgcgcgagcctattctacgatagcaaatcaggggcgtagaccagatattcat
attgttgctagcgttaagaatccagatggtaaagaattttatagagctccaacatctgga
cgacaagtgttttctccagcagacatggctcttaccactaaagctctgcaaggcgttgtg
caatatggtacttctacggaagctaggggtgttggcaaacctatagctggaaagtctggt
accgcaaacgatgagactgcatgcagctttgttggttttactcctagtgttgtaaccgtg
tttgctatatggtatccgaatgcgcagggaaatcctcagcctgttccgtctttccgcggt
tatccaggcggtgttgggtattctgcacatttgtttacaaagtatatgcgtcacgcgctt
actggaatgcctaccgagaagttcccagaagctaaggataacggcaaaattggtggtgaa
gatggcaagtggggacttggaggcaataggcgtacttcggaatacgactactcggataga
gcttctgacgataaagagccttataaggaaaataaggataaagtagataggacagaaaat
aagccttcagattctgcaggcgcggctgctggcgactcttcacgcgggtccgaaggatct
tatggatctgggcttggttcgggagagtctggtcaagctgaacgcaattcgtctggagca
tttgactcgccaggatcgccatatggatactctggatcagagactcaagaaggcgctgct
ggcggcgattaa
DBGET
integrated database retrieval system
