Gardnerella vaginalis HMP9231: HMPREF9231_1301
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Entry
HMPREF9231_1301 CDS
T01939
Name
(GenBank) glycosyl hydrolase, family 31
Organism
gvh
Gardnerella vaginalis HMP9231
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_31_2nd
Glyco_hydro_31_3rd
DUF5110
Motif
Other DBs
NCBI-ProteinID:
AEF31793
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Position
complement(1591451..1594237)
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AA seq
928 aa
AA seq
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MTLQDAREARGTQDVQDAHIFYDYAKNPLSKAKESQVISGKNWRITLITDSLVRLEWSEN
GEFVDAPTQTVVRRNFEDGTQIAAEKSQATEDEASRAFNPKSFNPKYSVKNLENGWIEVE
TEKLLISYNQQPFSKEGLSIVVRGVPGSQFNTWHYGDECHGNLLGTARTVDEADGAVKLG
MGVISRDGWAVLDDSRSAQIAYAAAVDGKENPYGAWVEPRAKANGSSLESNSKDLYFFGY
GHNYIGAIRDFYKLTGAQPLLPRFALSNWWSRYYRYSQDEYLQLMSRFKREGIPFSTAVI
DMDWHVTDVDPKYGSGWTGYTWNRDLFPDHRAFLRQLASEGLAVTLNLHPRDGVRAFEED
YAQVARDMGIDPASGKAVEFDLTNPRFLRAYLNMHRRMENEGVGFWWIDWQQGGVTKQAG
LDPLWMLNHVHYQDSGRGGAWPLTFSRYAGPGSHRYPVGFSGDSVTTWNSLAFQTYFTST
ASNIGYGWWSHDIGGHMLGVRCNELEARWYAFGAFSPINRLHSSCSPFAGKEPWNFPRET
RDAMVKMLRLRAQMLPYLYTMNYRAAVDGRPIVEPMYWQSPETLAAYEMPNEYRFGSQLV
VAPIVSKGCAQVERGCTAVWLPEGDWYDFFDGRRYVSRGCAGRRFEVWRGIDRVPAFARA
GAIVPMQVLPSEEDCARNEDVAKSVNSVENPRSLRILAFPGDCGEFVMREDNGRFEDARA
GKTADTRMELIWRDGNGTTQFVIDAAKGCASAVSALPSKRDWSVVFRGVACPDFSRVRVF
VGENQLESKAVEVSYEGEEGDLSLTVSVRNVPVGDCVRVIVDGGLCIAQDPKIGDCYRLL
LQAQMPYRGKEIAFDAIRQAGGSASAISELCALEYTSESEFERHQQSVDLTNAHAPQHPE
VAKWAQWKCTLPDSVKRALEEILIRSAL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgactttacaagatgcgcgtgaagcgcgtggaacacaggatgtgcaagacgcacacatt
ttttacgattacgctaaaaatccgctgtctaaagccaaagagtcgcaggttataagcggc
aaaaattggcgaatcactttaatcacggattcgcttgtgcgccttgagtggagcgaaaac
ggcgaatttgtagacgctcctacgcaaacagttgtaaggcgaaactttgaggatggcacg
cagattgccgcggaaaaatcgcaagcaaccgaagatgaggcatcgcgcgcttttaatcca
aaatcttttaatccaaaatatagtgtaaaaaatttggaaaatggctggatagaagtcgaa
accgaaaaactgttgatttcgtacaaccagcagccgtttagcaaagagggcttgagcatt
gttgtgcgcggagtgccaggctcgcaattcaacacatggcattacggcgacgaatgccac
ggcaatttgctcggcacagcgcgaacagtggacgaggcggatggtgctgtaaagcttgga
atgggcgtaatatctcgcgacgggtgggccgtgttagacgattcgcgctcggcacaaatc
gcgtacgcggctgctgttgatggaaaagaaaacccatacggggcatgggtggagccgcgc
gcaaaggcgaatggcagtagtctcgaatcaaactctaaagacttatacttctttggctac
ggtcacaactatataggcgcaattcgcgacttttacaagcttacgggcgcgcagccgctt
cttccgcgattcgcgctaagcaactggtggagcaggtactacaggtacagccaagacgaa
tatttgcagctgatgagccgatttaagcgcgaaggcataccgttttctactgccgtaatc
gacatggattggcacgtaacggatgtggacccaaagtacggttcgggatggactggctac
acgtggaaccgcgatttgttcccagatcatcgcgcgtttttgcgccaacttgccagcgaa
gggcttgccgtaacgcttaatttgcatccgcgagacggcgtgcgcgcgtttgaagaagac
tatgctcaagttgcgcgcgatatgggaattgaccctgcaagcggcaaggcagttgagttt
gaccttacaaatccgcgctttttgcgagcatacctaaacatgcatcggcgcatggagaac
gagggcgttgggttctggtggattgattggcagcagggcggagttacaaagcaggctggc
ttggatccgctttggatgcttaaccacgtgcactaccaggattcggggcgcggaggcgcg
tggccgctaacgttctcgcgctatgcggggcctggttcgcaccgatacccagtgggattc
tcgggagatagcgtaacaacgtggaattcgctggcttttcaaacttactttacttctacg
gcctccaacattggctacggctggtggagccacgatattggcggacacatgcttggcgtg
cgatgcaatgagctggaggcgcgctggtatgcgttcggcgcgtttagcccgattaatcgc
cttcactccagctgctcgccgtttgctggcaaagagccgtggaacttccctcgtgaaact
cgtgacgcgatggttaaaatgctgcgacttcgcgcgcaaatgctgccttatttgtacact
atgaactatcgcgcggcggttgatggcagaccaatcgtagagccaatgtattggcaatcg
ccagaaacgcttgcagcatacgagatgccgaatgagtaccgttttggcagccagcttgtt
gttgcgccaattgttagcaaggggtgcgcgcaagttgagcgcggttgcactgccgtttgg
cttccagaaggcgattggtacgatttctttgacggaaggcgctatgtttcgcgcggctgt
gctggccgcagatttgaggtttggcgaggaatcgaccgcgtgccggcgtttgcgcgcgct
ggggctattgtgccaatgcaagttttgccaagcgaagaagattgcgctcgaaatgaagat
gttgcgaagtctgtgaatagcgttgaaaatccgcgatctttgcgcattcttgcattccca
ggggattgcggcgagtttgtgatgcgcgaagataacggacgatttgaagacgcgcgcgct
gggaaaactgccgatacgcgcatggagcttatttggcgagatgggaatggaaccacacag
tttgtgattgatgcagcaaaaggatgcgctagtgccgtttctgcgctgccttccaagcgc
gattggagcgtagtatttagaggcgttgcttgcccagacttttcgcgcgttcgcgttttt
gttggggaaaatcagcttgaatctaaggctgtagaagtttcatatgaaggcgaagagggc
gacttaagtcttactgtttctgtgcgcaacgtgcctgttggcgattgcgtgcgagtgatt
gttgatggcggactgtgcattgcgcaagaccctaagattggcgattgctacaggctgctt
ttacaagcgcaaatgccgtaccgcggcaaggagattgcttttgatgcgattcgccaagct
ggtggtagcgcgagtgctataagtgagctttgcgcgcttgaatacactagcgagagcgag
tttgagcgccatcagcaaagcgttgacttgactaacgcgcatgcgccgcagcacccagag
gttgctaagtgggcgcaatggaagtgcacgctgcctgactcggttaagcgcgcgcttgag
gagattttaattcgcagcgcgttgtaa
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