Gardnerella vaginalis HMP9231: HMPREF9231_1308
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Entry
HMPREF9231_1308 CDS
T01939
Name
(GenBank) ABC transporter, solute-binding protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9231_1308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_1308
Transporters [BR:
gvh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
HMPREF9231_1308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AEF31228
LinkDB
All DBs
Position
1602025..1603254
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AA seq
409 aa
AA seq
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MTNMKKVLGAGLAIATMFGFAACGSSTNAGSSNKANPVKLTVWSSSEDQKAGGWIQAMEK
AFKKDHPEVTFKNAVVAPPDAAKTVKQDAKAAADVYLFPNDQLGDLVKANAIGELSDDAA
KQVKEDNDDTIIQSVTAQDGKLYGVPYMGNTWFMYYDKSKFSDEDVKSLDKMLEKGKVAF
DISNAWYLPGFYLDGNMTLFGEKSNDGKAGIKIGDKAAEITKYVAKLIQNKNFVMDGDGA
GLAGIKNHTVDAYFSGSWDAGDVKKALGDNYAAAQLPKFKSEDGEHQMKSFAGSKAVAYN
PNSKAPEMAAKFAAFLGSKESQEQMYKLHGDIPVAKSLADLVKDNPAAVAQMNTIAKTSV
LQPTVPEMGAFWDPMKTFGTALANKEVNDGNAAAKIADFQKGFEEALKK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatatgaagaaagtgctgggcgcaggcctcgcaatcgctacaatgtttggattt
gctgcatgcggttctagcaccaacgctggctccagcaacaaggcaaacccagtaaagctc
accgtgtggtcttcttccgaagatcagaaggctggcggctggattcaggctatggagaaa
gccttcaagaaggatcacccagaggttacttttaagaacgctgttgttgctccaccagat
gctgctaagaccgttaagcaggacgctaaggctgctgccgacgtttacctgttccctaac
gatcagctcggcgacttggtaaaggcaaacgcaattggcgagttgagcgacgacgctgcc
aaacaggttaaggaagacaacgatgataccatcatccagtctgtaaccgctcaggatggc
aagctttatggcgttccatacatgggcaacacttggttcatgtactacgataagtccaag
ttctccgacgaagacgttaagtcactcgataagatgctcgaaaagggcaaggttgctttc
gatatcagcaacgcttggtaccttccaggcttctacctcgatggcaacatgaccctcttc
ggcgagaagagcaacgatggcaaggctggcatcaagattggtgacaaggctgccgaaatc
accaagtatgttgcaaagctcattcagaacaagaacttcgtaatggatggcgatggcgct
ggcttagctggcattaagaaccacactgttgacgcttacttctctggctcttgggatgct
ggcgacgtaaagaaggctttgggcgacaactacgctgctgctcagcttccaaagttcaag
tctgaagatggcgaacaccagatgaagtccttcgctggttctaaggctgttgcttacaac
cctaactccaaggctccagagatggccgctaagttcgctgcattcctcggttctaaggaa
tcccaggagcagatgtacaagcttcacggcgatatcccagttgctaagtctttggctgat
ctcgttaaggacaacccagccgctgtggctcagatgaacaccattgctaagacttctgtc
ttgcagccaaccgttccagaaatgggtgccttctgggatccaatgaagaccttcggtact
gcattggcaaataaggaagtcaatgatggtaacgctgctgcaaagattgcagacttccag
aagggcttcgaggaagctctcaagaagtaa
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