Gardnerella vaginalis HMP9231: HMPREF9231_1310
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Entry
HMPREF9231_1310 CDS
T01939
Name
(GenBank) ABC transporter, permease protein
KO
K15772
arabinogalactan oligomer / maltooligosaccharide transport system permease protein
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9231_1310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_1310
Transporters [BR:
gvh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
HMPREF9231_1310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
FWWh
SPC25
Tom5
Motif
Other DBs
NCBI-ProteinID:
AEF31324
LinkDB
All DBs
Position
1604815..1605735
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AA seq
306 aa
AA seq
DB search
MSNKKDLMQGEQTVHSVRSVPFWRDQRIRRIFGDIVAHLFLIVMAVIWLAPIVWVFLESF
NQNTAPYQTTFFPTKYTFNNYIQLFTEREVLDFPRMFLNTLIVSIFVCIISLFFVLVVAF
CMSRLRFRGRKTFMNIALILGMFPGIMAVIAIYFILKAFGLTNGSVVLISLIIVYSAGSG
MGFYVMKGYMDTIPKSLDEAAYLDGCTTWQVFWKIILPICKPMIVFQAIVSFLGPWLDFV
LVKTIARTQDNYTVALGLYQMLQREYINHWFARFSAGAVCVSIPIAILFIVMQRFYEESM
SGSVKG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaataagaaggatcttatgcaaggcgaacagactgtgcatagtgtacgtagtgtc
ccgttctggcgcgatcagcgtatccgccgcatattcggagacattgtagctcatctgttc
ctgattgttatggctgtgatttggcttgctccaatcgtttgggtgttcttggaaagcttt
aaccagaacactgcaccatatcagacaacgttcttcccaactaagtacacgtttaataat
tacattcagctgtttactgagcgagaagttcttgacttcccacgaatgttcttaaacacc
ttgattgtatctattttcgtgtgcattatctctctgttcttcgtgcttgtagtagcgttc
tgcatgtctcgtttgcgtttccgcggtcgtaagacatttatgaacattgctttgattctt
ggtatgttcccaggcatcatggcagttatcgctatctacttcattttgaaggcttttggc
ttgacgaatggttctgttgttcttatttcccttataatcgtttactctgctggtagcggc
atgggcttctacgttatgaagggctatatggacacgattccaaagtctttggatgaagcc
gcttatttggacggatgcacaacttggcaagtgttctggaagattattcttccaatatgc
aagcctatgattgtgttccaggctattgttagcttcttgggtccatggcttgacttcgtt
ttggttaagactattgcccgtactcaagataattacactgtggctttgggcttgtaccag
atgttgcagagagaatacatcaatcactggttcgcacgattctccgctggagctgtgtgc
gtttccattccgattgcaatcctgtttattgttatgcagcgattctatgaagagtcgatg
tctggctctgttaagggatag
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