Gardnerella vaginalis HMP9231: HMPREF9231_1312
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Entry
HMPREF9231_1312 CDS
T01939
Name
(GenBank) hypothetical protein
KO
K07493
putative transposase
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HMPREF9231_1312
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GFIT
Motif
Pfam:
Transposase_mut
MULE
Zn_ribbon_TiaS
Mtrc-MtrF_II-IV_dom
Motif
Other DBs
NCBI-ProteinID:
AEF31018
LinkDB
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Position
complement(1608026..1609156)
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AA seq
376 aa
AA seq
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MNNPLCNNCHHKMSKNGHTNAGTTRYRCTNCGASKSRAYDKQSNDLTVSLNWLLSNKTQD
KYSYDFSARTLRRKNKLLWDLWPQVPFVDEVYDYIHVDGIHLGRKSVVLIAYSGKHVLGW
YVARSENSRAWGYLMQRIAEPLVVVCDGSGGIRKAVKTYWPNTKIQRCLFHIGLNIKALT
GVNSRLTPGKQLLSLANIVSDIKTENQARHWLISYNNWVNTWSDFLKEKSKYCDGSIADT
HQRLVRAKSMIDRRIHEGYMFTFLSPPEDCTHPIPPTNNAIESMNSRIRAMLRNHRGLSL
LKRIHAICWWCYLNTSKPRDKSWIVTHSFTSKRIEQLYRQAWERSNQGLSEVFGIPARYG
TGVDWNEFHKSREYYQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaataacccactatgcaataactgtcatcataaaatgagcaagaatggtcacaccaat
gctggcactactagataccgttgtactaactgtggggcttctaaaagtagagcgtatgat
aaacaatcaaacgatttaacagttagtttaaattggcttttatctaataagactcaggat
aagtattcatacgatttctcagcccgtaccttaagacgtaagaataagcttttatgggac
ttatggccgcaagtaccattcgtggatgaagtttatgattacattcatgttgatggtatt
catttaggacgtaaatctgtagtattaatcgcttactctgggaaacatgttttaggctgg
tacgtggctcgtagtgagaatagtcgcgcgtggggttatctcatgcagcgtattgcggaa
ccgctagtagtagtttgtgatggttctggtggtattcgtaaagcagtaaaaacatattgg
cctaatacgaaaatacaacgttgcttgttccatataggtcttaacattaaagctttaact
ggagttaattctcgtcttactcctggtaagcaattactatcattagctaacattgtttct
gacataaaaacagaaaatcaagctcgtcattggcttatttcttacaataattgggtgaat
acttggagtgattttcttaaagagaaaagcaagtattgtgatggtagtattgctgatact
catcaaagactagttcgtgctaaatcaatgattgataggcgtattcatgagggttatatg
tttacttttcttagccctccagaagattgcactcatcctattccaccaactaataatgct
attgaatcaatgaatagtagaattcgcgctatgctacgtaatcatcgtggattaagcttg
ttaaaacgtatacacgctatatgctggtggtgttatttaaacacgagtaagccaagagat
aagtcttggatagtcactcattcttttactagtaaacgtatagaacaactctataggcaa
gcttgggagcgttctaatcaaggattatctgaagtatttggaataccagcaagatatggt
actggtgttgattggaatgagttccataagagtcgtgaatactaccagtaa
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