Gardnerella vaginalis HMP9231: HMPREF9231_1340
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Entry
HMPREF9231_1340 CDS
T01939
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gvh03000
]
HMPREF9231_1340
03036 Chromosome and associated proteins [BR:
gvh03036
]
HMPREF9231_1340
Transcription factors [BR:
gvh03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
HMPREF9231_1340
Chromosome and associated proteins [BR:
gvh03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HMPREF9231_1340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
HTH_IclR
MarR
MarR_2
HTH_36
HTH_45
HTH_11
HVO_A0114
TrmB
DUF7343
HTH_20
HTH_47
Fe_dep_repress
NirdL-like_HTH
HTH_41
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AEF31072
LinkDB
All DBs
Position
complement(1637555..1638052)
Genome browser
AA seq
165 aa
AA seq
DB search
MTGNSHKIENNIPSGLNANVSTVAPIDSTDAIIVDILEHDGRATLTRLAKASGLSVSAVQ
SRVQKLERRGIITGYRALIDYERRGLPVSAFVAVTPLDFEQEASVPAKLKDIEGIEACYS
ITGSPSFMLVVRVATPSKLEELINTIHRIVPVSTETTMVLQTYFD
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaaactctcataagattgaaaataatattccttctggcttgaacgctaatgtg
agcacagttgctcctatagattctacagatgcgattattgtagatattcttgaacatgat
ggtcgtgcaacattaaccagactagctaaagcatctggattatcggtttctgccgtacaa
tctagagtacaaaagcttgagcgcagaggaattatcactggttaccgtgcgttgattgac
tatgagcgcagaggcttgccagtaagcgcatttgttgctgtaacacctcttgactttgag
caagaagcatctgttccagccaagttgaaagatattgaaggtattgaagcctgctattct
atcactggaagcccaagtttcatgctcgtagttcgtgttgctacacctagcaagctagaa
gagctaattaacacgattcataggattgtgccagttagcacagaaacaactatggttttg
cagacttatttcgactag
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