Gardnerella vaginalis HMP9231: HMPREF9231_1348
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Entry
HMPREF9231_1348 CDS
T01939
Name
(GenBank) Thiol-activated cytolysin
KO
K11031
thiol-activated cytolysin
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9231_1348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
gvh02042
]
HMPREF9231_1348
Bacterial toxins [BR:
gvh02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
HMPREF9231_1348
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GFIT
Motif
Pfam:
Thiol_cytolysin
Thiol_cytolys_C
Motif
Other DBs
NCBI-ProteinID:
AEF31665
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Position
1647709..1649259
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AA seq
516 aa
AA seq
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MKSTKFYRNAAMLLLAGATIVPQCLAAPAMAAPSAKDSEPATSCAAKKDSLNNYLWDLQY
DKTNILARHGETIENKFSSDSFNKNGEFVVVEHQKKNITNTTSNLSVTSANDDRVYPGAL
FRADKNLMDNMPSLISANRAPITLSVDLPGFHGGESAVTVQRPTKSSVTSAVNGLVSKWN
AQYGASHHVAARMQYDSASAQSMNQLKAKFGADFAKIGVPLKIDFDAVHKGEKQTQIVNF
KQTYYTVSVDAPDSPADFFAPCTTPDSLKNRGVDNKRPPVYVSNVAYGRSMYVKFDTTSK
STDFQAAVEAAIKGVEIKPNTEFHRILQNTSVTAVILGGSANGAAKVITGNIDTLKALIQ
EGANLSTSSPAVPIAYTTSFVKDNEVATLQSNSDYIETKVSSYRNGYLTLDHRGAYVARY
YIYWDEYGTEIDGTPYVRSRAWEGNGKYRTAHFNTTIQFKGNVRNLRIKLVEKTGLVWEP
WRTVYDRSDLPLVRQRTISNWGTTLWPRVAETVKND
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtacaaagttctaccgtaatgcagcaatgttgctcctcgcgggcgcaactatt
gttccacaatgcttagcagcaccagcaatggccgctccttccgctaaggattctgaacca
gctacatcttgcgcagctaagaaagactcgttgaataattatttgtgggatttgcaatac
gataaaacaaacattctcgcccgtcatggcgaaaccattgagaacaaattctccagcgac
agcttcaacaagaacggtgaattcgttgttgttgagcatcagaagaagaacatcaccaat
acaacttcaaatttgtcggttacttccgccaacgatgatcgcgtatacccaggtgctctt
ttccgtgctgataagaatttgatggacaatatgccaagcctgatttctgcaaaccgcgct
ccaataacgttgagcgttgatttgccgggattccacggcggcgaaagtgctgtaactgtt
cagcgcccaaccaagagctctgtaacttccgcagtgaacggcttagtttctaagtggaat
gcacaatatggagcaagtcatcatgttgcagctcgcatgcagtacgattctgcaagcgca
caaagcatgaaccagctcaaggctaagtttggtgctgattttgccaagattggtgttccg
ctgaagattgatttcgatgcagtacacaagggtgagaagcagactcaaattgtgaacttc
aagcaaacttactacaccgtaagcgttgatgcaccagatagcccagcagatttctttgct
ccttgcactacgccagacagcttgaagaaccgtggcgttgacaacaagcgcccaccagtt
tacgtgtcaaacgtagcttatggtcgctcaatgtacgtaaagttcgataccaccagcaag
agcactgatttccaggctgcggtagaagcagcaattaagggcgtagaaatcaagccaaac
accgaattccatcgcattctccagaatacttctgttactgcagtgattcttggtggcagc
gctaatggtgcagctaaagttattacaggcaatatcgatacgcttaaggctttgattcag
gaaggtgcaaatttgagcacctctagcccagcggttccaattgcatacaccacttccttc
gtcaaggataacgaagtagcaactttgcaatccaacagcgattatattgaaacgaaggtt
tcttcttatcgcaatggctacttgactttggaccaccgtggagcttatgtagctcgctac
tacatctactgggatgagtacggcaccgaaattgacggcactccttacgtgcgttctcgc
gcttgggaaggcaatggtaagtatcgtacagctcacttcaacaccactattcagttcaaa
ggaaatgtacgcaatctacgaatcaagttggttgaaaagactggtttggtttgggaacca
tggcgcacagtatatgaccgttctgatttgccactagttcgtcagcgtactattagcaac
tggggcacaaccttgtggcctcgcgttgctgaaactgtaaagaacgactga
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