KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_1365
Entry
HMPREF9231_1365   CDS       T01939                                 
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
gvh  Gardnerella vaginalis HMP9231
Pathway
gvh00270  Cysteine and methionine metabolism
gvh01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    HMPREF9231_1365 (dcm)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gvh03000]
    HMPREF9231_1365 (dcm)
   03032 DNA replication proteins [BR:gvh03032]
    HMPREF9231_1365 (dcm)
   03036 Chromosome and associated proteins [BR:gvh03036]
    HMPREF9231_1365 (dcm)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gvh02048]
    HMPREF9231_1365 (dcm)
Enzymes [BR:gvh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     HMPREF9231_1365 (dcm)
Transcription factors [BR:gvh03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    HMPREF9231_1365 (dcm)
DNA replication proteins [BR:gvh03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    HMPREF9231_1365 (dcm)
Chromosome and associated proteins [BR:gvh03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    HMPREF9231_1365 (dcm)
Prokaryotic defense system [BR:gvh02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    HMPREF9231_1365 (dcm)
SSDB
Motif
Pfam: DNA_methylase
Other DBs
NCBI-ProteinID: AEF31728
LinkDB
Position
complement(1669413..1670687)
AA seq 424 aa
MSKTIKVAELFAGVGGFRLGLEGYTPSYGNNFTAEPAGPFKTVWANQWEPAGQESKQFAW
RCYEKRFGKGSCVNEDIAEVLKKFEHGECDIPDFDMLVGGFPCQDYSVAKPLALSSGIDG
KKGVLWWSINKMLELRHPKYVLLENVDRLLKSPAAQRGRDFAIILSCLFRLGYSVEWRVI
NAADYGMPQRRRRVYVFAEHDSKKWYNLSEHLLQNGVIARAFPVSVAKKNAAQYEFSISD
NPYVISQDFGKQAKVSLFQNAGVMQDGIVYTVKTDAVFSGNAMTLGSVLVDANQVPEEYW
IEEDKLASWQYLKGGKRELRKASNGFEYMYSEGPIAFPDKIDVPSRTILTGEGGKSASRT
KHVVMQNGRLRRLVPDELDQLQMFPKGWTNDGMSDGHRAFCMGNALVTGIPHKIGEVLAN
DISA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgtccaagacaataaaagttgctgaactttttgcgggagtaggtgggtttcgtcttggg
cttgaagggtatacgccttcttatggaaacaattttactgcagaaccagcaggacctttc
aaaactgtttgggcaaaccagtgggagcctgcagggcaagaatccaagcaatttgcgtgg
agatgctatgagaagcgttttggcaaaggtagctgtgttaatgaagatatagcagaagtg
cttaaaaaatttgaacatggggaatgtgatattccagattttgacatgcttgttggcggt
tttccttgtcaagattattctgtggcaaaaccgttagcattgtcttctggaattgacggc
aaaaaaggcgttctgtggtggagtattaataaaatgttggaattgcgccaccctaaatac
gttctacttgaaaatgttgaccgtttattaaaatcacctgccgcgcagcgcggtagggat
tttgccattattctctcttgtctttttcgattaggatacagcgtagagtggcgagttatt
aatgctgctgactatggaatgcctcaaagacgtagacgagtatatgtttttgcagaacat
gattctaagaaatggtataacttgtccgagcatcttttgcaaaacggtgttattgcacga
gcttttccagtatctgttgcaaaaaaaaatgctgcgcaatatgaattttctattagtgac
aatccgtatgttatatctcaagattttggcaaacaagctaaggtgagcctattccagaat
gctggtgttatgcaagatggaatagtttataccgttaaaacggatgctgtgttttctggc
aatgcaatgacattaggtagcgttttagttgatgccaatcaagtgcctgaagaatattgg
attgaagaagataagcttgcttcttggcagtatcttaaaggcggtaaaagggagttgcga
aaagcttcaaatggatttgagtacatgtattccgaaggccctattgcttttccagataaa
attgatgtaccaagcagaactattcttacaggcgaaggtgggaaaagtgctagtagaacc
aaacatgttgttatgcaaaatggaagattgagaagacttgttccagatgagctagaccag
ctgcagatgttccctaaaggttggacgaatgatggaatgagtgatggtcatagagcgttc
tgtatggggaatgcgctggttactggtattccgcataaaattggcgaagttctcgctaat
gacatttcggcataa

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