Gardnerella vaginalis HMP9231: HMPREF9231_1405
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Entry
HMPREF9231_1405 CDS
T01939
Symbol
gidB
Name
(GenBank) 16S rRNA methyltransferase GidB
KO
K03501
16S rRNA (guanine527-N7)-methyltransferase [EC:
2.1.1.170
]
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gvh03009
]
HMPREF9231_1405 (gidB)
03036 Chromosome and associated proteins [BR:
gvh03036
]
HMPREF9231_1405 (gidB)
Enzymes [BR:
gvh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.170 16S rRNA (guanine527-N7)-methyltransferase
HMPREF9231_1405 (gidB)
Ribosome biogenesis [BR:
gvh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HMPREF9231_1405 (gidB)
Chromosome and associated proteins [BR:
gvh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HMPREF9231_1405 (gidB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GidB
Methyltransf_31
Methyltransf_16
MTS
Methyltransf_25
PCMT
Methyltransf_12
Talin_R4
YdjM
Motif
Other DBs
NCBI-ProteinID:
AEF31519
LinkDB
All DBs
Position
complement(1722722..1723432)
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AA seq
236 aa
AA seq
DB search
MEENLNKDNNDNTQETIDELENSPLLSEVLGDALDKCKMFHVKLQKEGLLRGLVGPRDMS
ILWERHILNSAAVVPFIKEAIKKSKKKSIADVGSGGGFPGIVIAACLPDCDVTLIEPMER
RVLWLKECVELMGLDNVTIFHGRSDEIIEKIKSHDISPFDVVTCRAVAPMTKLAGWTIPL
LNTHGQLIALKGKSAQAEIEKAAKMIKKAKGVNPRVVDAPVANGLQSTTVVLVDKA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatttaaataaagataataacgataatactcaagagacaattgatgaatta
gaaaattcaccattactaagcgaagttttaggtgatgctcttgataaatgtaagatgttt
cacgtgaaacttcaaaaagagggcttgctgagagggttagttggacctagagatatgagt
attctctgggaaagacatatattaaattctgcagctgttgttccttttattaaggaagct
attaaaaagtctaagaaaaaatctatagcagatgtaggaagtggtggtggattccctggt
attgttatagcagcatgtttgcctgattgtgatgtaacattaattgaacctatggaaaga
cgcgttctttggctaaaagaatgtgtagaacttatgggattagacaatgtcactattttt
cacggaagatcagatgaaattattgaaaaaataaaatctcatgatatatcaccgtttgac
gttgtaacgtgtagagctgtagcacctatgacaaaactagcagggtggactattcctcta
ttaaatacacatggtcaactgattgcgttaaaggggaaatctgcgcaggctgaaattgag
aaagccgcaaaaatgatcaaaaaagcgaagggtgtgaatcctagggttgttgatgctcct
gttgcaaatggtcttcaatctacgactgttgtattagttgacaaagcataa
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