Gloeobacter violaceus: gll1616
Help
Entry
gll1616 CDS
T00148
Name
(GenBank) ORF_ID:gll1616
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
gvi
Gloeobacter violaceus
Brite
KEGG Orthology (KO) [BR:
gvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gvi03016
]
gll1616
Enzymes [BR:
gvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
gll1616
Transfer RNA biogenesis [BR:
gvi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
gll1616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
WHD_RNase_II
CSD_RNase_II
pAdhesive_8
KhtT_N
Motif
Other DBs
NCBI-ProteinID:
BAC89557
UniProt:
Q7NK64
LinkDB
All DBs
Position
complement(1731378..1733369)
Genome browser
AA seq
663 aa
AA seq
DB search
MERGTLVEFRLQGGRRLGVISGPDGKKNFNLQTQTGNTQTVHPRQITYQVAGGPYRTSEL
PAFESQVQNYLDQADLEVAWELFRESHALVSPEDLAQLLFDTAAPAACYAAHCLLSEDRL
YFKQKGDGYEPRPTAQVEELRHQQAVEQRKAQEQARFLARVQSVLGGAADEWEPSDRLRL
DALERYALWGDEASDRASAQDVLSQLGHTTRSEDAIALLVALRLWSPHENIHLRRSGIPV
HFGTPVSEYARKLLENPPADPASRRDFGRLAIYTIDDESTREIDDGLSLEMLEDGREKLW
IHIADPTRWVQPGDPLEAEARRRATSVYLPTGAIPMFPPELATGPMSLLPGQLNCALSFG
AIIGPDGAVENFEVTPALVRTVYPVTYEEADPLIASGEEPVLARLHEIALARRRHRHQRG
AVSIDLPEAQVKVKDDEIRLEILGDSASRLLVSEMMILAGELAARLAIEAGIPVPFRTQP
APELPPADELLRLPAGPVREFAVCRCMQRGEVSVYPARHAGLGLDAYTQATSPIRRYSDL
LVHFQIKAHLRHEPLPLTLEHLKELLAMIDAAGQEVTQIERLSERYWIYEYLRHRRHQVQ
PGLVLDYLGGDPQRALVLLESVALRLPVRLDRPVSKGEMVDLQIVQVDPRQDLLVLKEVR
QAH
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagagggactctggtggaatttcgcctgcaaggaggccggcgcttgggagtgatc
agcggcccggacggcaagaaaaatttcaacctccagacccagacgggcaacacccagacc
gtgcatccccggcaaatcacctaccaggtggccggtggcccctaccgcaccagcgaactg
ccggcttttgagtcgcaggtgcaaaattacctggaccaagcagatctggaggtggcctgg
gagctttttcgcgagagccacgcgctggtaagccccgaggatctcgcccagctgctgttt
gacaccgccgctcccgccgcttgctacgcggcccactgtctactgagcgaagaccggctc
tacttcaagcaaaagggcgacggttacgagccgcgcccgaccgcccaggtcgaggagttg
cgccaccagcaggcggtcgagcagcgcaaagcccaggaacaggcgcgctttctagccaga
gtgcaatcggtgttgggtggggccgcagacgaatgggagcccagcgaccggttgcgcctc
gatgccctcgaacgctacgcgctgtggggagacgaagcttccgaccgcgcgagcgcccag
gacgtgctgagccagttgggccacaccacccgcagcgaggacgcgattgcccttttggtc
gccctcaggctctggtcgccccacgaaaatattcacctgcgccgctcgggcatcccggtg
cacttcggcactccggtaagcgaatacgcccgcaagttgctggagaatccgccggccgat
ccggcctcgcgccgcgattttgggcggcttgccatctacacgatcgacgacgaatcgacc
cgcgaaatcgacgacggcttgagccttgaaatgctcgaggacggccgcgaaaaattgtgg
atccacatcgcggatccgacccgctgggtgcagccgggcgacccgctcgaagcggaagcc
cggcggcgggccaccagcgtctacctgcccaccggcgccatcccgatgtttccgccggaa
ctggccaccggtccgatgagcctgctgccggggcaactcaactgtgctttgagcttcggc
gccatcatcggtcccgacggtgccgtcgagaacttcgaggtcaccccggccctggtgcgc
acggtctacccggtcacctacgaagaagccgacccgcttatcgccagcggcgaggagccg
gtgcttgcgcgcctgcacgaaatcgccctggcccgccgccgccaccgccaccagcgcggg
gcggtcagcatcgacctgcccgaagcgcaggtcaaagtcaaagatgacgaaatccgcctg
gagattctgggggattcggcttcccggctgctggtctccgagatgatgatcctggcgggg
gaactggcggcgcggctggccatcgaggcgggcatcccggtgccttttcgcacccaaccg
gcgcccgaactgccccctgccgacgagttgctgcgcctgcccgccgggccggtacgcgaa
tttgccgtctgccgctgcatgcagcgcggcgaggtgagcgtctacccggcccgccacgcc
gggttgggcctcgacgcctacacccaggccacctcgcccatccgccgctacagcgacctg
ctggtgcactttcaaatcaaggcccacctgcgccacgagccgctcccgctgaccctggag
cacctcaaagagttactcgccatgatcgacgccgccggccaagaggtcacccagatcgag
cggctctcggagcgctattggatctacgagtacctgcgccaccgccgccaccaggtccag
cccggtctggtgctcgactatctgggcggcgacccgcagcgggcgctggtgctgctcgag
agcgtcgccctcaggctgccggtgcgcctcgaccggcccgtctccaaaggtgagatggtc
gatttacagatcgtgcaggtggacccgcgccaggatctgctggtactcaaggaagtgcgc
caggcccactga
DBGET
integrated database retrieval system
