Gloeobacter violaceus: glr0041
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Entry
glr0041 CDS
T00148
Symbol
recJ
Name
(GenBank) ORF_ID:glr0041
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gvi
Gloeobacter violaceus
Pathway
gvi03410
Base excision repair
gvi03430
Mismatch repair
gvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
glr0041 (recJ)
03430 Mismatch repair
glr0041 (recJ)
03440 Homologous recombination
glr0041 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gvi03400
]
glr0041 (recJ)
DNA repair and recombination proteins [BR:
gvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
glr0041 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
glr0041 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
glr0041 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAC87982
UniProt:
Q7NPL4
LinkDB
All DBs
Position
40091..42412
Genome browser
AA seq
773 aa
AA seq
DB search
MPIGLSSMLPKQRWRIAQEDPVQARQLAEAFGLSPLIAQVLINRGLTTCELAEHFLAPES
WVLPSAGEAFDQLPRALDLLAQAIESGTAIAICGDYDCDGMTSTALLLRAVRSLGGHIEY
AIPSRLQEGYGINLRIVEAFYERGIGLILTVDNGICAYAPIARAVELGMGVIITDHHDLP
ERLPPADAILNPKMIPRTSPYAALAGVGVAYVLAGELARRLGRTGLADCLLELFTLGTVA
DLAPLVGVNRAWVLSGLAKIPGSSNTGVQALLAASGLAGRSDLKPEAIGFALGPRINAVG
RIGDPVTVIELLTTDDPAVAAERAAECELANQHRQALCAQIEAEAARMLEVEQAGGLDLG
CERVIVLAREGWHHGVIGIVASRLKDRHGAPVFIAAIEGEHARGSARGTPEFHVYEALKD
SAELLTGFGGHPMAGGFSLLAANLPAFRERLVQFARARLAPEQVAPLVEVDAQVQLARVD
RRLLGEIDRLQPCGLGNAEPVFWVAGARVVEQKAMGKTRTHLNLTVSDGTAERRAVGWRM
AEWLPLPPFVDIAFQVKENNWQGHSKVELELVGLRAAHPAPIELPEPPPLDRPIRWHDHR
HCEAAAFLHAFVAAQASPVLLYGHARPQLPRGLPVHYDRPQPAHDYEHLLLWSLPPSPLH
LRWLIAATRPNCVHLFAQAVPTAHAWTLQRHLRATYLPERPVEILRLAQLWWVSPRALCE
ALVEAGYLADWRSVVADEWHDWLGAELAGLAAWYASPVEVLEALLAPQPTLKR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgccaataggtttgtcctcgatgctccccaaacagcgctggcggattgctcaagaagat
ccggtgcaggcccggcaactggccgaggcgttcggcctctcgccgctgattgcccaggtg
ctgatcaaccgcggcctcaccacctgcgaattggcggagcattttctggcccccgaaagc
tgggtactgccctcagcaggcgaagcgttcgaccaactaccccgggcgctcgacctgctg
gcgcaagctatcgagtcgggcacggcaatcgccatctgcggcgactacgactgcgacggc
atgaccagcacggcgctactgctgcgggcggtgcgcagcctggggggacacatcgagtat
gcaatcccaagccgcctgcaggaaggctacggtatcaacctgcgcatcgtcgaagccttt
tatgaacggggcattgggctgattttgacggtggacaacggcatctgcgcctatgcgccc
atcgcccgggcagtggaactgggcatgggcgtcatcatcaccgatcaccacgacctgccc
gagcgcctcccccccgccgacgccattctcaaccccaagatgattcccagaacttcgccc
tacgcggccctggccggggtgggggtagcctacgtgctggccggagaattggcccggcgt
ctggggagaaccggcctcgccgattgtctgctggaactgtttaccctgggaaccgtggcc
gacctggcgcctttggtaggggtcaaccgcgcctgggtgctctcgggactcgcaaaaatc
cccggctcgtccaataccggggtgcaggccctgcttgccgcctcgggcctggccggtcga
agcgacctcaagcccgaggccatcggcttcgccctcgggccgcgcatcaacgccgtgggc
cgcatcggcgatccggtgacagtcatcgagctgttgaccaccgacgatccggccgtggcc
gccgagcgggccgccgagtgtgaactggccaaccagcaccgccaagcactatgcgcgcag
atcgaggcggaggcggcccggatgctcgaagtcgagcaagccggggggctggatctcgga
tgcgagcgggtgattgtgctggcgcgcgagggctggcaccacggcgtgatcggcatcgtg
gcaagccgcctcaaggaccgccacggcgcgccggtgtttatcgccgccatcgaaggcgaa
cacgcccgcggctcggcccggggtacccccgaattccacgtctacgaagcgctcaaagac
agcgctgaattgctcacaggctttggcggccacccgatggcgggcggcttttcgctgctt
gccgccaacttgccggcctttcgggagcggcttgtacaatttgcccgcgcccggcttgcc
cctgagcaggtcgcccccctcgtcgaggtggacgcccaggtgcaacttgcccgggtcgat
cgtcggctgctgggggagatcgaccggttgcaaccttgcggtctgggtaacgccgaaccg
gtcttttgggtggcaggagcgcgcgtcgtcgagcaaaaggcgatgggcaagacccgcacc
cacctcaatctcaccgtgagcgacggcaccgccgagcggcgggcggtgggctggcggatg
gccgagtggctgccactgccgccgtttgtcgatatcgcctttcaggtcaaagagaacaac
tggcagggccattcaaaagttgaactggagttggtgggcctgcgcgccgcccaccccgcc
cccatcgaactaccggaaccgcccccattggaccggccgatccgctggcatgaccatcgg
cactgcgaagctgcagcctttttgcacgcattcgtcgctgcccaagcttccccggtgctg
ctctacggccacgcaaggccgcagttgcctcgcgggctgccggtgcactacgaccggccg
caaccggcccatgactacgaacacttgctgctgtggagcctgccgccctcgcctttgcac
ctgcgctggctgatcgccgccacccgaccgaattgcgtgcatctgttcgcccaagctgtg
cccaccgcgcacgcctggacattacagcgccacttgagagcgacctacttgcccgagcgg
cccgtggaaatcttgcgtcttgcccagctgtggtgggtctccccccgcgccttgtgcgaa
gcgctcgtcgaggcgggctatctcgccgactggcgctccgtcgtggccgacgagtggcac
gactggctcggggcggaactggcgggtctcgccgcctggtacgctagcccggttgaggtg
ctcgaagcgctgttggcccctcagccgacgctcaagcgatag
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