Gloeobacter violaceus: glr2283
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Entry
glr2283 CDS
T00148
Symbol
rpoB
Name
(GenBank) ORF_ID:glr2283
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gvi
Gloeobacter violaceus
Pathway
gvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
glr2283 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gvi03021
]
glr2283 (rpoB)
03400 DNA repair and recombination proteins [BR:
gvi03400
]
glr2283 (rpoB)
Enzymes [BR:
gvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
glr2283 (rpoB)
Transcription machinery [BR:
gvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
glr2283 (rpoB)
DNA repair and recombination proteins [BR:
gvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
glr2283 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
BAC90224
UniProt:
Q7NIA0
LinkDB
All DBs
Position
2445180..2448518
Genome browser
AA seq
1112 aa
AA seq
DB search
MPDFRYADALPEVRMSNALTTPNYLLPDLVEIQRESFRWFLEEGLIEELLSFSPITDYTG
KMELHFLQDYKLKEPKYSVEEAKRRDSTYSVQMYVSTRLVNKETGEIKEQQVFIGELPLM
TDRGTFIINGAERVIVNQIVRSPGVYYKQELDTNGRKTFNASLIPNRGAWLKFETDANDL
VWVRIDKTRKLSAVVLLKALGLSDNEILDAFRHPEYFQKTIEKEGNYSEEEALLELYRKL
RPGEPPTVSGGQQLLETRFFDPKRYDLGRVGRYKLNKKLRLSVPETTRILTPQDILASID
YLINLEFDIGSPDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSEAETLTPA
SLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDI
HPSHYGRICPIETPEGPNAGLIGSLATHARVNSYGFIETPYKVVKDGRLSGEIKYLTADE
EDEFRVAAGDVAVDEGGNILANPVTIRYRQEFGLASPAEVDYVAVSPIQIVSVATSLIPF
LEHDDANRALMGANMQRQAVPLLRPERPLVGTGLEGQAARDSGMVIVSDIDGAITYVSGE
QIRVRGENGQEFAYPLQKYQRSNQDTCLSQRPIVNVGDQVRNGQILADGSATEGGELALG
QNILVAFMPWEGYNYEDAILISERLVYDDVFTSIHVEKFEIEARQTKLGPEEITREIPNV
GEDSLRNLDERGIVRIGAWMEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNS
LRVPNGEKGRVVDVRVFTREQGDELPPGANMVVRVYLAQKRKVQVGDKVAGRHGNKGIIS
KILPKEDMPYLPDGRPVDIVLNPLGVPSRMNVGQVFETLLGWAGACLNVRFKVTPFDEMY
IKEASRYLVHEKLMEAREVTGDPWVYSDTGKHIGKIQVYDGRTGEAFDRPVTVGQIYMMK
LVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTLQELLTVK
SDDMTGRNEALNAIVKGKAIPRPGIPESFKVLVRELQSLGLDVSVHKIETQHDGSSRDVE
VDLMADVGGRRTPNRPTYENIGGPREMEFSED
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgactttcgctatgctgacgccctgcctgaggtacgcatgagcaacgctttgacc
acgcccaattatttgctgcccgaccttgtcgagatccagcgggagagctttcgctggttc
ctcgaagagggtctgatcgaggagttgttgagtttttcacccatcaccgactacaccggc
aagatggagttgcattttctgcaggactacaaactcaaagaacccaagtactccgtcgaa
gaggcaaagcggcgcgactcgacctattcggtccagatgtacgtctccacccgcctcgtc
aacaaagagaccggtgaaatcaaagagcagcaggtctttatcggcgagttgcctttgatg
actgaccggggcacatttatcatcaatggtgccgagcgggtgatcgtcaaccagatcgtc
cgttctcccggggtctactacaagcaagaactcgacaccaacggccgtaagaccttcaac
gcttcgctcatccccaaccgcggcgcctggctgaaattcgagaccgacgccaacgacttg
gtgtgggtgcgcatcgacaagacccgcaaactctcggcggtggtgctgctcaaggccctg
ggcctttcggacaacgaaattctggacgcttttcgccatccggagtacttccagaaaacg
attgaaaaagaaggcaactactccgaagaagaagcgttgctcgaactctaccgcaagctg
cgtcccggcgagcctccgaccgtctccggcggccagcagcttctggagacccgcttcttt
gatcccaagcgctacgacctgggccgggtgggccgctacaagctcaacaaaaagctgcgg
ctgagcgtccccgagacgacccgcatcctcactccccaggatatcctcgcctcgatcgac
tacctgatcaacctcgaattcgacatcggctcccccgacgacatcgaccacctcggcaac
cgccgggtgcgctcggtgggcgagctgttgcaaaaccaggtgcgcgtcggcctcaatcgc
ctggagcgcatcatccgcgagcggatgaccgtcagcgaagccgagacgctcaccccggcc
tcgctggtcaaccccaaaccgctggtggccgccatcaaggagttcttcggctcctcgcag
ctctcgcagtttatggaccagaccaatccgctcgccgagctgacccacaagcgccgtctt
tcggccctcggtcccggcggtctgacgcgcgagcgggccggtttcgcggtgcgcgacatc
cacccgtcgcactacggccgtatctgcccgatcgagacgcccgaaggccccaacgcggga
ctgatcggttcgcttgccacccacgcccgggtcaactcctacggcttcatcgagacgccc
tacaaggtggtcaaagacggtcggctcagcggcgaaatcaaatacctcaccgccgatgag
gaggacgaatttcgggtggcggcgggggacgtggccgtcgatgaggggggcaacatcctt
gccaacccggtcaccatccgctatcgccaggagttcggcctcgcctccccggccgaggtc
gactacgtggccgtctcgcccattcagatcgtctcggtggccacttcgctgattccgttt
cttgagcacgacgacgccaaccgggcgctgatgggcgccaacatgcagcgccaggcggtg
ccgctgttgcgccccgaacggcccctggtgggcacgggcctcgaagggcaggcggcccgc
gactcgggcatggtgattgtctccgacatcgacggggcgatcacctacgtctcgggcgag
cagatccgggtgcgcggcgagaacggccaggaatttgcctacccgctgcaaaagtaccag
cgctccaaccaggacacctgcctcagccagcgcccaatcgtcaacgtcggcgaccaggtg
cgcaacggccagatcctggcggacggttcggccaccgaggggggtgaactggccctcggt
caaaatatcctggtggccttcatgccctgggaagggtacaactacgaggacgccatcctc
atctccgaacggctcgtctacgacgacgtgttcacctcgatccacgtcgaaaaattcgaa
atcgaagcgcgccagaccaaactcggtcccgaggagatcacccgcgaaattccgaacgtc
ggcgaagactcgctgcgcaacctggatgagcgcggcatcgtgcgcatcggcgcctggatg
gaagcgggcgacatcctggtgggcaaagtcacccccaagggcgaatcggaccagccgcct
gaagagaagctgctgcgggccatcttcggcgagaaggcgcgcgacgtgcgcgacaactcg
ctgcgggtgcccaacggcgaaaaaggccgggtcgtggacgtgcgcgtcttcacccgcgag
cagggcgacgagttgccgccgggggcgaatatggtcgtgcgcgtgtacctggcccaaaag
cgcaaggtgcaggtgggcgacaaggtggccggccgccacggcaacaagggcatcatctcc
aaaattctgcccaaggaggacatgccctacttgcccgacggccgcccggtcgacattgtc
ctcaatccgctgggcgtcccttcgcgcatgaacgtcggccaggtcttcgagacgctgctc
ggttgggccggtgcctgtctcaacgtgcgcttcaaggtcactccctttgatgagatgtac
atcaaagaagcgtcgcgctacctggtccacgagaagctgatggaggcgcgcgaggtgacg
ggggatccgtgggtctactccgacaccggcaagcacatcggcaaaattcaggtctacgac
ggacgcacgggcgaggcgttcgatcggccggtgaccgtgggtcagatctacatgatgaag
ctggtgcacctggtggacgacaagatccacgcccgctccaccggcccctactccctggtc
acccagcagcccctgggcggcaaggcccagcagggcggccagcgcttcggcgaaatggag
gtgtgggcgctcgaggccttcggcgccgcctacaccttgcaggagttgctcacggtcaag
tccgacgatatgaccggccgcaacgaggcgctcaacgccatcgtcaagggcaaggcgatc
ccgcgcccgggcattcccgagtccttcaaggtgctcgtgcgcgaactgcagtcccttggc
ctcgacgtgtcggtccacaagatcgagacgcagcacgacggctcttcgcgcgacgtcgaa
gtcgacttgatggccgacgtcggcggacggcgcaccccgaaccggcccacctacgaaaac
atcggcggcccccgcgagatggagttctccgaggattaa
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