Gloeobacter violaceus: glr2394
Help
Entry
glr2394 CDS
T00148
Name
(GenBank) ORF_ID:glr2394
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gvi
Gloeobacter violaceus
Pathway
gvi03420
Nucleotide excision repair
gvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
glr2394
03430 Mismatch repair
glr2394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gvi03400
]
glr2394
Enzymes [BR:
gvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
glr2394
DNA repair and recombination proteins [BR:
gvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
glr2394
MMR (mismatch excision repair)
Other MMR factors
glr2394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
DEAD
DUF3553
ResIII
CarD_TRCF_RID
DUF724
Motif
Other DBs
NCBI-ProteinID:
BAC90335
UniProt:
Q7NHZ0
LinkDB
All DBs
Position
2554866..2557247
Genome browser
AA seq
793 aa
AA seq
DB search
MVLGMDALLNPSQQKAVERFNGPLLVVAGAGSGKTRVLTYRIAHLIETYQVDPEHILAVT
FTNKAAGEMKERILQLFCERTARSRGGEAFAALPDPERRAIAGRVRRELIQPLWVGTFHA
LCARMLRYDIDKYTDQRGRTWQRNFTIFDESDVQDQIKDIVTKQLNLDDRRYVPRSVRFA
ISGAKNQGLSPEEYQHSEGGSLRARTIAQVYERYQDQLARNNALDFDDLIWVPVQLLRRR
PDVLDYWHRRFRHILVDEYQDTNRTQYDLIRLLATNNQPKSEWDWRDRSVFVVGDADQAI
YSFRQADFRILMDFQSDFGDGLADDETETLIKLEENYRSSATILDVANELIANNIERIDK
VLRATRPAGLPVSLHEAEDEVAEAEYIVGQLRKLKDADTRPWNDFAVLYRVNAQSQPIEQ
ALSRWGVPYTVVGGLRFYDRREIKDVLSYLKAIHNPADSVALKRSMSAPRRGIGKTTLDK
LEAGAGMLQTSLWQLLTDETSIKNLAGRTSGPILQFVRFVERLQELAARVRVSELLDTVL
KESGYVQMLQEEGTEEAEGRLENVLELRSVVQRFEEESEDPENATLEAFLANVSLASDLD
NLEAGAERISLMTLHAAKGLEFPVVFLGGLEDGLFPHFRAIQDGDSAAIEEERRLCYVGI
TRAKERLFLSYAQARRLYGDRQPAIPSQFLKELPAEKLAGTRVRKGLADRRRDRAERIAA
RPAAVPPLAPPARRKSPAQNWAVGDRVEHDQFGLGQITHVLGVGEKQYLAISFPGQGKKV
IDPRLAPLRKLAE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcggtatggatgctttgctcaatccttcgcagcaaaaagcggtggagcgcttc
aacggtccgctgttggtggtggcgggtgcgggtagcggcaagacgcgggtactgacctat
cgcatcgcccatctcatcgagacttaccaggtggaccccgagcacatcctggcggtcacc
ttcaccaacaaagcagcgggcgagatgaaggagcgcatcttgcaactcttttgcgagcgc
accgccagaagccgcggcggtgaggcgtttgccgccctgcccgaccccgagcggcgcgcc
atcgcaggccgggtgcgccgggaattgattcagcctttgtgggtggggacttttcatgcc
ctgtgcgcccgtatgctgcgctacgacatcgacaagtacaccgaccaacgcgggcgcacc
tggcagcgcaacttcacgatcttcgacgaatcggacgtgcaggatcagatcaaagacatc
gtcaccaagcagctcaacctggacgaccgccgctacgtgccccgctcggtgcgcttcgcc
atcagcggcgccaaaaaccagggcctttcgccggaagaataccagcactcagaaggcggt
tcgctgcgcgcccgcacgatcgcccaggtctacgagcgctaccaggaccagctggcgcgc
aacaacgccctcgatttcgacgatctgatctgggtgccggtgcagttgttgcgccggcgc
cccgacgtgctcgattactggcaccgccgcttccgtcacatcctggtcgacgagtaccag
gacaccaaccgcacccagtacgacctgattcgcctactcgccaccaacaaccaacccaaa
agcgagtgggactggcgcgaccggtcggtctttgtggtgggcgacgcggaccaggccatc
tacagctttcgccaggcggattttcgcatcctgatggattttcagtccgattttggcgac
ggcctagccgacgacgagaccgagacgctcatcaagctcgaagagaactaccgctcctcg
gccacgattctcgatgtcgccaacgaactgatcgccaacaacatcgagcgcatcgacaag
gtgctgagggccacccgtccggcgggcttgcccgtgtcgctgcacgaggcggaggacgag
gtggccgaagctgagtacattgtcgggcaactgcgcaaactcaaagacgccgacactcgt
ccctggaacgactttgcggtactctaccgcgtcaacgcccagtcgcagcccatcgagcag
gcgctttcgcgctggggggtgccctacacggtggtgggcggcttgcgcttctacgaccgc
cgtgagatcaaggacgttctgagttacctcaaggcgatccacaatcccgccgactcggtc
gccctcaagcgctcgatgtccgcgccgcgccgcggcatcggcaaaacgacactggataag
ctcgaagccggggccgggatgctccagacttcgctatggcaactgctcaccgacgagacg
agtattaaaaatttggccgggcgcaccagcggaccaattctccagttcgtgcgctttgtc
gagcgcctgcaggagctggccgcccgggtgcgcgtctcggaactgctcgatacggttctc
aaagagtcgggctacgtgcagatgcttcaggaagaaggcaccgaggaagccgaggggcgc
ctcgaaaacgtcctggagttgcgctcggtggtccagcgcttcgaagaagaaagcgaagat
cccgaaaacgcgacgctcgaagcctttttggccaatgtctcgctcgcgtcggatctggac
aatctcgaagcgggggccgagcgcatctcgctgatgacgctgcacgccgccaagggtctg
gagtttccggtggtgtttttgggcggcctcgaagacggcctttttccgcactttcgggcg
attcaagacggtgacagcgccgccatcgaggaggagcgccgattgtgctacgtggggatc
acccgcgccaaggagcgtctgttcttgagctatgcccaggcccgccgcctctacggcgac
cgccagcccgccatcccgtcgcagtttctcaaggaactgcccgccgagaaactggccggt
acccgcgtgcgcaagggtcttgccgaccggaggcgcgaccgggccgagcggattgccgcc
cgcccggccgccgtcccgccgctcgccccgcccgcgcggcgcaaaagccccgcccagaac
tgggcggtgggcgaccgggtcgagcacgaccagttcggtctcgggcagattacccacgtc
ctgggtgtgggcgagaagcagtacctggccatcagcttccccggccagggcaaaaaagtg
atcgacccgcgcctggcgcctctgcgcaagctggctgagtga
DBGET
integrated database retrieval system
