Gloeobacter violaceus: glr3198
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Entry
glr3198 CDS
T00148
Symbol
topA
Name
(GenBank) ORF_ID:glr3198
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gvi
Gloeobacter violaceus
Brite
KEGG Orthology (KO) [BR:
gvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gvi03032
]
glr3198 (topA)
03400 DNA repair and recombination proteins [BR:
gvi03400
]
glr3198 (topA)
Enzymes [BR:
gvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
glr3198 (topA)
DNA replication proteins [BR:
gvi03032
]
Prokaryotic type
DNA Topoisomerases
glr3198 (topA)
DNA repair and recombination proteins [BR:
gvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
glr3198 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Zn_ribbon_3
Lar_restr_allev
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAC91139
UniProt:
Q7NGH1
LinkDB
All DBs
Position
3402505..3404802
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AA seq
765 aa
AA seq
DB search
MSKSLVIVESPAKAKTISKILGKNFVVKASAGHIRDLPQKEMGVNVKNDFEPKYVIIPKK
EEVVEELKGAARNADRVYLAPDPDREGEAIAWHLAQILDIPGDRLQRIEFHEITKQAIQN
AVAHPRDIDINRVDAQQARRILDRLVGYKLSPLLWKKVQRGLSAGRVQSVAVRLLCDREK
EIQAFVSEEYWTVHGRFRQSAQVEATPFSADLVRWSGKKPDLGNETAARAVVEVLTGAAS
RVDSVKTRERQKEPQPPFITSTLQREGASALGLTVKRTMAIAQQLYEGIDLGEEGPVGLI
TYMRTDSTRVAEEAQEAAREFILAAYGKSYYPSRRRQYGAKKGAQDAHECVRPTDINRPP
DAIKKSLTPDQFKLYRLIWQRFTASQMTAATLETRTVEIAATPTAGRPDALFRVSVTRTI
FDGYTRVYEEAREEAATGDEEAAGAAPVLEEGEALTLLTVDPKQHFTQPPARFSEATLVK
ALEEQGIGRPSTYAPTIGTIQERGYVNKDGRTLIPTDLGMKVNDQLVQHFPNIVDTEFTA
NMEAQLDEVEKGSQRWTQLLADFYGPFVETLKAADEEMKRVVIVTDHLCESCGRPLLNRY
GRFGNFLGCSGYPECDFTHQLTRDNKPVPKDRPAEGISCNQCGHAPMLITYGRYGEYLKC
PACGKSQPKSTGITCPKCSKGQIVERRSKMGKNFYGCDQYPDCDFVLWSRPIDKPACPEC
GSILLYKPRKRGDDMVACSACKFTAPAQEMVGEEEVERQAELLTG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcgctagtcatcgtcgaatcccccgccaaggccaaaacgatcagcaagatc
ctcggcaagaactttgtcgtcaaggcctccgccgggcacatccgcgaccttccccaaaaa
gagatgggcgtgaatgtcaaaaatgacttcgagcccaagtacgtgatcattcccaaaaaa
gaagaggtggtcgaggaactcaaaggggccgcccgcaatgccgaccgagtctatctggcc
cccgaccccgaccgcgagggagaagcgatcgcctggcatctggcgcagattctggatatt
cccggcgacaggctgcagcgcattgagtttcacgagatcaccaagcaggccatccagaac
gccgtcgcccatccccgcgacatcgatatcaaccgggtcgatgcccagcaggcgcggcgc
atcctcgatcggctggtgggctacaagctcagcccgctgctgtggaaaaaagtgcagcgc
ggcctgtccgccgggcgggtgcagtcggtggcggtgcgcctgctgtgcgaccgcgaaaaa
gaaatccaggcgttcgtgagcgaagagtactggaccgtccacggccgcttccgccagagt
gctcaggttgaagccaccccgttcagcgccgatctggttcgctggtcgggcaaaaaaccg
gatctaggcaacgagacggcggcgcgggcggtggtcgaagtcctgacgggagctgcctcg
cgggtcgattcggtcaagacccgcgagcggcaaaaagaaccccaaccgcccttcatcacc
agcaccctgcagcgcgaaggcgcttcggcattgggcctcaccgtcaagcgcacaatggcc
atcgcccagcaactctacgaaggcatcgatttgggtgaagaggggccggtggggctgatc
acctatatgcgcaccgacagcacccgggtggccgaagaagcccaggaagcggcgcgcgaa
tttatcttggccgcctacggcaaatcgtactacccgagccgccgccgccagtacggcgcc
aaaaaaggcgcccaggacgcccacgagtgcgtccggcccaccgacatcaaccgccccccc
gacgcaatcaaaaaatcgctcaccccggaccagttcaagctctaccgcctgatctggcag
cgctttacggcctcgcagatgaccgcggccaccctggagacgcgcacggtcgaaatcgcc
gccacccccacagccggccgccccgacgccctgtttcgcgtctcggtcacccgcacgatc
ttcgacggctacacccgcgtctacgaagaagcgcgcgaggaagcagccacgggcgacgaa
gaagcggccggtgccgcgccggtgctcgaagagggcgaggcgctcaccttgctcacggtc
gaccccaagcagcactttacccagccgcccgcgcgcttctccgaggccactctcgtcaag
gccctcgaagagcaggggatcggcagaccgagtacctacgcccccaccatcggcacgatc
caggagcgcggctacgtcaataaagatggccgcacgctcatccccaccgacctgggcatg
aaagtgaacgaccaactggtccagcactttcccaacatcgtcgataccgaatttaccgcc
aacatggaagcgcagctcgacgaagtcgaaaagggttcccagcgctggacccagttgctt
gcggatttttatgggccgtttgtggagacgctcaaggccgccgacgaggagatgaagcgg
gtggtgatcgtcaccgatcacctgtgcgagagctgcggtcggccgctgctcaaccgctac
ggccgcttcggcaacttcttgggctgctcgggctatccggagtgcgactttacccaccag
ctcacccgcgacaacaaaccggtccccaaggaccgccccgccgaggggatttcctgcaac
cagtgcggccacgcgccgatgctcatcacctacggccgctacggcgagtacctcaagtgc
cccgcctgcggcaagagccagcccaaatcgacggggatcacctgccccaagtgcagcaaa
ggccagatcgtcgagcgccgctcgaagatgggcaagaatttttacggctgcgaccagtat
cccgattgcgacttcgtgctgtggagtcggcccatcgacaaacccgcctgtcccgagtgc
ggctcgatcttgctctacaaaccccgcaagcgcggcgacgacatggtggcttgttcagcc
tgcaaattcaccgcccccgcccaggagatggtgggcgaggaggaagtggagcggcaggct
gaattgcttaccggttga
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