Gloeobacter violaceus: glr3934
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Entry
glr3934 CDS
T00148
Symbol
dnaE
Name
(GenBank) ORF_ID:glr3934
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gvi
Gloeobacter violaceus
Pathway
gvi03030
DNA replication
gvi03430
Mismatch repair
gvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
glr3934 (dnaE)
03430 Mismatch repair
glr3934 (dnaE)
03440 Homologous recombination
glr3934 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gvi03032
]
glr3934 (dnaE)
03400 DNA repair and recombination proteins [BR:
gvi03400
]
glr3934 (dnaE)
Enzymes [BR:
gvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
glr3934 (dnaE)
DNA replication proteins [BR:
gvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
glr3934 (dnaE)
DNA repair and recombination proteins [BR:
gvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
glr3934 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
SLBP_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAC91875
UniProt:
Q7NEE6
LinkDB
All DBs
Position
4127878..4131357
Genome browser
AA seq
1159 aa
AA seq
DB search
MQYVNLHTHSDYSLLDGASQVPDLIERAKGLEMPAIAITDHGVMYGAIELIKKCRAAGLK
PIVGTEGYVINGDIRDKSRRYRRYHQILLAKNLTGYKNLVKLVTISHLDGVQGKGIFSRP
CMNKEMLVQYHEGIICTSACLGGEIPQLILAGQFEQARRTTQWYKDLFGDDFYLEIQDHG
QREDRVVNVAVVHLGRELGIKVIATNDSHFTSCEDVDAHDALLCIQTGKLVVEENRMRYT
GTEFLKSAEQMAGMFRDHLSDEVIAQALTTTLEIAEKVEKYDRELLGDSRLPRFPIPHGH
TAESYLEQVTWEGMRERFGSEIAPDYRERLKYELGIIEQMGFATYFLVVWDYIKYARDHG
IAVGPGRGSAAGSLVAYALRITNIDPVRYNLLFERFLNPERKSMPDIDTDFCIERRDELI
RYVTEKYGEQYVAQIITFNRLTSKAVLKDVARVLDISYSEADKLAKLIPVVRGKPVPLKK
MISEETPAPEFKQSYEGDERVRKWVELAMRIEGTNKTFGVHAAGVVISSVPLDELVPLQR
NNDGQVITQYYMEDIADLGLLKMDFLGLRNLTMIHRAQELIERYRGVRIDLDNLPLEDSG
TYALLGKADLEGIFQLESSGMKAVVRDLRPSNIEDISSILALYRPGPLDAGLIPEFINRK
HGRKKIEYLHPLLEPILKETYGVLCYQEQIMKVAQELGGYTLGQADLLRRAMGKKKREEM
EKHRSIFVDGSAKNGVPSRVADELFEQMVVFAEYCFNKSHSAAYGYVTFQTAYLKAHYPV
EYMAALLSSVKGDQDKVQKYIASCMGMGIEIEPPDINRSGFDFTPQEKSILFGLGAVKNV
GEGAIQALLDARDSQGPFKNLANLCDRVDMRVINKRALESLIKAGAFDAFSSNRGQLIAD
MEKVVDWAQDRARDRALGQFNLFDALSGGGDRNPTGYQSAPSAPPTPDLPPADKLKFERE
LLGFYISDHPLKAVRESARLLAPVNLADLADCRAESTVSAIALVREVKNVVTKKGDRMAI
VQIEDLTGSTEAVVFPKTYERVGGYFIPDARLMLWAKIDMRDDRPQLIIQDAEPVEEVRM
VVIDLEARADLQTWHQIRDVLQAHQNETAHIAVIASVKTDQRHKLVRFGPQFRVSNDSSL
IQALQCKGFSAHTTRIVGG
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacgtcaatctccacacccatagcgactacagtttgctggatggtgccagccag
gtgccggacctcatcgagcgggcgaagggcctggagatgccggccatcgcgatcaccgat
cacggggtaatgtacggggccatcgagctaatcaaaaaatgccgcgccgccgggctcaag
ccgatcgtgggcaccgaagggtacgtgattaacggcgacatccgcgacaagagccgccgc
taccggcgctaccaccagattctgctggccaagaacctcaccggctacaagaacctcgtc
aagctggtgacgatctcgcatctggacggagtgcagggcaaagggatcttctcccggccc
tgcatgaacaaggagatgctcgttcagtaccacgaggggattatctgcacctccgcctgt
ctggggggcgaaatcccgcagctcatcctggccggccagttcgagcaggcccgccgtacc
acccagtggtataaagacctttttggcgacgatttttatctggagattcaggatcacggc
cagcgcgaggaccgcgtcgtcaacgtcgccgtcgtccaccttgggcgcgagctgggcatc
aaggtaatcgccaccaacgactcgcactttacctcctgcgaggatgtcgacgcccacgac
gcgctgttgtgcatccagacgggcaagctggtggtcgaagagaaccgcatgcgctacacc
ggcaccgagtttctcaaaagtgccgagcagatggcgggtatgtttcgcgaccacctgagc
gacgaggtgatcgcccaggcgctcaccaccactctggagatcgccgaaaaagtcgaaaag
tatgaccgcgaactattgggagattcgcgcctgccgcgctttccgatcccccatggccac
accgccgagagctacctggagcaggtgacctgggagggcatgcgcgagcgcttcggcagc
gaaattgccccggactaccgcgaacggctcaagtacgaactggggatcatcgagcagatg
ggttttgccacctactttctggtggtctgggactacatcaagtacgcccgcgaccacggc
atcgccgtgggtccgggtaggggcagcgcggccggatccctggtggcttatgcgcttcgc
atcaccaacatcgacccggtgcgctacaacctgctttttgagcgcttcctcaacccggag
cgcaagtcgatgcccgacatcgacaccgacttttgcatcgagcggcgcgacgaactgatt
cgctacgtcaccgagaagtacggcgagcagtacgtggcgcagatcatcaccttcaaccgc
ctcacctccaaagcggtgctcaaggatgtcgccagagtgctcgacatttcctatagtgag
gcagacaagcttgccaagctcatcccggtcgtgcgcggcaaacccgtcccgctcaagaag
atgatctccgaggaaacccctgcccccgagttcaagcagtcctacgagggcgacgagcgg
gtcagaaaatgggtggaactcgccatgcgcatcgagggcaccaacaaaaccttcggcgta
cacgccgccggggtggtgatttcgagtgtgccccttgacgagttggtgcctctgcagcgc
aacaacgacggccaggtgatcacccagtactacatggaggacatcgccgatctgggccta
ctcaagatggactttctggggcttagaaacctgacgatgatccatcgcgcccaggagttg
attgagcgttaccggggggtccgcatcgacctggacaatctgccgctggaagactccgga
acctatgcactactgggtaaggcagatctggagggtatttttcaacttgaatcctcagga
atgaaggcagttgtgcgcgatctgcgcccttcaaatattgaggatatttcttcaattctt
gctctttatcgtcctggtccactggacgccgggcttatcccagaatttatcaaccgaaaa
catggccgcaaaaaaatagaatatttgcatccactgctggaaccgatactgaaagagact
tatggtgttctatgctatcaagaacagatcatgaaagttgcccaagaattaggtggttat
accctcggtcaagccgaccttcttcgaagagcaatgggcaagaaaaagcgcgaagagatg
gagaagcatcgttccatattcgtggatggatctgccaagaacggcgtgcccagccgagta
gcagatgagttgtttgagcagatggttgtgttcgcggagtactgtttcaataaatctcat
tctgcagcttacggttatgttactttccaaacggcgtatttaaaagcgcactacccggtc
gagtacatggctgcgctgctcagttcggtcaaaggcgatcaggacaaggtacaaaaatat
atcgcaagctgcatgggcatgggtattgaaattgaaccgccggatatcaatcgttcgggt
ttcgattttacgccccaagagaagagcattctgtttggattgggagcggtcaaaaacgtc
ggtgaaggagcgatccaggcgttgctcgacgctcgcgacagtcagggtccgttcaagaac
ctcgcgaatctttgcgatcgggtggacatgcgggtaatcaacaagcgcgccctcgaatcg
ctgatcaaagccggggcgttcgatgcgttttcgtccaatcggggacagttgattgccgac
atggaaaaggtggtcgattgggcgcaggaccgtgcccgcgaccgtgccctcggacagttc
aatctttttgatgcactctcaggtggcggggatcgcaacccaaccggttatcaaagcgct
cccagtgctccgccgacaccggatctgccgcccgcggacaaactcaaattcgaacgggag
ctgttgggcttttatatttccgatcatccgctcaaggcggtgcgcgaaagtgcccggctg
ctcgccccggtcaacctcgcggatctggccgattgccgggctgagagcaccgtgagcgcc
atcgccctggtgcgcgaggtcaaaaacgtcgtcaccaaaaaaggcgaccggatggcgatc
gtgcagatcgaggatctgaccggctcaacggaggccgtggtctttccgaaaacctacgag
cgggtgggcggctattttattcccgacgcgcgcttgatgctctgggcaaagatagatatg
cgcgacgaccggccgcaactgatcattcaagacgccgaacccgtcgaagaagtgcgcatg
gtggtcattgacctcgaagcgcgcgccgatttacagacctggcaccagatccgcgatgtg
ctgcaggcgcaccagaacgaaactgctcacattgcggtgatcgcttcggtgaagaccgac
caacgccacaaactcgtgcgcttcggtccccaatttcgtgtcagcaacgacagctcgctc
attcaagccctccagtgcaagggcttctcggcgcacaccacccggattgtcggcggataa
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