KEGG   Gloeobacter violaceus: glr4277
Entry
glr4277           CDS       T00148                                 
Symbol
rpoC1
Name
(GenBank) ORF_ID:glr4277
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
gvi  Gloeobacter violaceus
Pathway
gvi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    glr4277 (rpoC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gvi03021]
    glr4277 (rpoC1)
   03400 DNA repair and recombination proteins [BR:gvi03400]
    glr4277 (rpoC1)
Enzymes [BR:gvi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     glr4277 (rpoC1)
Transcription machinery [BR:gvi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     glr4277 (rpoC1)
DNA repair and recombination proteins [BR:gvi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      glr4277 (rpoC1)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 Cas9-BH
Other DBs
NCBI-ProteinID: BAC92218
UniProt: Q7NDF8
LinkDB
Position
4498067..4499893
AA seq 608 aa
MPRMEQRFDYIKISIASPERVMAWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPSKDWECYCGKYKRVRHRGIVCERCGVEVTESKVRRHRMGYIKLAAPVTHVWYLKGI
PSYISTLLDMPLRDVEQVVYFNAYVVLNPGNAENLYYKQLLTEDQYIEVEDQIFAEDSSL
ELPEGWAKMGAEAIHELLAAIEMESEAERLRADLGESKGQKRTKLIKRLRVLDNFIATGS
RPEWMVLTAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIV
RNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGR
SVIVVGPKLKLHQCGLPKEMAIELFQPFVIHKLIQRGLVNNIKAAKKMIQRNDARIWSVL
DEVITGHPVLLNRAPTLHRLGIQAFEPILVSGRAIQLHPLVCTAFNADFDGDQMAVHVPL
SLESQAEARLLMLASNNVLSPATGRPIITPTQDMVLGCYYLTVDNPDATKGSGKYFGSSE
DAVIAYNQGMIDLHAKIWLRFEGEVETDNPEDLRVRRDEQGNALSQFVRTTVGRIIFNQV
IQETLVAS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgcccaggatggaacagcgtttcgactacatcaagatctctattgcctccccggagcgg
gtcatggcctgggggcagcgcaccctccccaacggccaggtcgtcggggaggtgaccaag
cccgagacgatcaactaccgcaccctcaagcccgagatggacgggcttttttgtgagcgc
atcttcgggccttccaaagattgggagtgctactgcggcaaatacaaacgcgtgcgccac
cggggcatcgtctgcgagcgctgcggcgtcgaagtcaccgaatcgaaggtgcgccgccac
cgcatgggctatatcaagctcgccgccccggtcacccacgtctggtacctgaagggcatt
ccttcttatatttcgacgctgctcgacatgcccctgcgcgacgtcgagcaggtggtctat
ttcaacgcctacgtggtgctcaacccgggcaacgccgagaacctctactacaaacagctg
ctcaccgaggaccagtatatcgaggtcgaagatcagatcttcgccgaggattcgagcctg
gaactgcccgaaggttgggcgaagatgggggccgaagcgatccacgaactgctcgcggcc
atcgaaatggagtccgaagccgagcggctgcgcgcagatctgggcgagtcgaaggggcag
aagcgcaccaaactgatcaagcgcctgcgggtgctcgacaacttcatcgccaccggttcg
cggccggagtggatggtactgaccgccatcccggtcatcccgccggatctgagaccgatg
gtgcagctcgacggcggccgttttgccaccagcgacctcaacgacctctaccgccgggtg
atcaaccgcaacaaccgcctcgcgcgtctgcaggagatcctggcgcccgagatcatcgtg
cgcaacgaaaagcgtatgctccaggaggcggtggacgcgctcatcgacaacggccggcgc
ggccggacggtggtcggcgccaacaaccggcccctcaagtcgctctcggacatcatcgag
ggcaagcaggggcgctttcgccagaacctgctcggtaagcgcgtcgactactcgggccgc
tcggtgatcgtggtcggccccaagctcaagctccaccagtgcggcctgcccaaggagatg
gccatcgagctgtttcagccgtttgtcatccacaagctcatccagcgcggactggtcaac
aacatcaaagccgccaaaaagatgatccagcgcaacgacgcgcgcatctggagcgtgctc
gacgaggtgatcaccggccacccggtgctcctcaaccgcgcgcccacgctccaccgcctg
ggtatccaggcgttcgaaccgatcctggtctccggtcgtgccattcagctccatccgctg
gtgtgcacggccttcaacgccgacttcgacggcgatcagatggcggtgcacgtgccgctg
tcgctggagtcgcaggcggaggcgcgcctgttgatgctcgcttccaacaacgtgctttcg
cctgccaccggtcggccgatcatcacccctacccaggacatggtgctcgggtgctactac
ctgacggtcgacaaccccgacgccaccaaaggctccggtaaatacttcggcagcagcgaa
gacgccgtgatcgcctacaaccagggcatgatcgacctgcacgccaagatctggctgcgc
tttgagggcgaggtcgaaaccgacaaccccgaggatttgcgcgtgcgccgtgacgagcag
ggcaacgcgctctcgcagttcgtgcgcaccaccgtcgggcgcatcatcttcaaccaggtc
attcaagaaacgcttgtcgccagctag

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