Entry |
|
Symbol |
rpoC1
|
Name |
|
KO |
|
Organism |
gvi Gloeobacter violaceus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:gvi00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
glr4277 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:gvi03021]
glr4277 (rpoC1)
03400 DNA repair and recombination proteins [BR:gvi03400]
glr4277 (rpoC1)
Enzymes [BR:gvi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
glr4277 (rpoC1)
Transcription machinery [BR:gvi03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
glr4277 (rpoC1)
DNA repair and recombination proteins [BR:gvi03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
glr4277 (rpoC1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4498067..4499893
|
AA seq |
608 aa
MPRMEQRFDYIKISIASPERVMAWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPSKDWECYCGKYKRVRHRGIVCERCGVEVTESKVRRHRMGYIKLAAPVTHVWYLKGI
PSYISTLLDMPLRDVEQVVYFNAYVVLNPGNAENLYYKQLLTEDQYIEVEDQIFAEDSSL
ELPEGWAKMGAEAIHELLAAIEMESEAERLRADLGESKGQKRTKLIKRLRVLDNFIATGS
RPEWMVLTAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIV
RNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGR
SVIVVGPKLKLHQCGLPKEMAIELFQPFVIHKLIQRGLVNNIKAAKKMIQRNDARIWSVL
DEVITGHPVLLNRAPTLHRLGIQAFEPILVSGRAIQLHPLVCTAFNADFDGDQMAVHVPL
SLESQAEARLLMLASNNVLSPATGRPIITPTQDMVLGCYYLTVDNPDATKGSGKYFGSSE
DAVIAYNQGMIDLHAKIWLRFEGEVETDNPEDLRVRRDEQGNALSQFVRTTVGRIIFNQV
IQETLVAS |
NT seq |
1827 nt +upstreamnt +downstreamnt
atgcccaggatggaacagcgtttcgactacatcaagatctctattgcctccccggagcgg
gtcatggcctgggggcagcgcaccctccccaacggccaggtcgtcggggaggtgaccaag
cccgagacgatcaactaccgcaccctcaagcccgagatggacgggcttttttgtgagcgc
atcttcgggccttccaaagattgggagtgctactgcggcaaatacaaacgcgtgcgccac
cggggcatcgtctgcgagcgctgcggcgtcgaagtcaccgaatcgaaggtgcgccgccac
cgcatgggctatatcaagctcgccgccccggtcacccacgtctggtacctgaagggcatt
ccttcttatatttcgacgctgctcgacatgcccctgcgcgacgtcgagcaggtggtctat
ttcaacgcctacgtggtgctcaacccgggcaacgccgagaacctctactacaaacagctg
ctcaccgaggaccagtatatcgaggtcgaagatcagatcttcgccgaggattcgagcctg
gaactgcccgaaggttgggcgaagatgggggccgaagcgatccacgaactgctcgcggcc
atcgaaatggagtccgaagccgagcggctgcgcgcagatctgggcgagtcgaaggggcag
aagcgcaccaaactgatcaagcgcctgcgggtgctcgacaacttcatcgccaccggttcg
cggccggagtggatggtactgaccgccatcccggtcatcccgccggatctgagaccgatg
gtgcagctcgacggcggccgttttgccaccagcgacctcaacgacctctaccgccgggtg
atcaaccgcaacaaccgcctcgcgcgtctgcaggagatcctggcgcccgagatcatcgtg
cgcaacgaaaagcgtatgctccaggaggcggtggacgcgctcatcgacaacggccggcgc
ggccggacggtggtcggcgccaacaaccggcccctcaagtcgctctcggacatcatcgag
ggcaagcaggggcgctttcgccagaacctgctcggtaagcgcgtcgactactcgggccgc
tcggtgatcgtggtcggccccaagctcaagctccaccagtgcggcctgcccaaggagatg
gccatcgagctgtttcagccgtttgtcatccacaagctcatccagcgcggactggtcaac
aacatcaaagccgccaaaaagatgatccagcgcaacgacgcgcgcatctggagcgtgctc
gacgaggtgatcaccggccacccggtgctcctcaaccgcgcgcccacgctccaccgcctg
ggtatccaggcgttcgaaccgatcctggtctccggtcgtgccattcagctccatccgctg
gtgtgcacggccttcaacgccgacttcgacggcgatcagatggcggtgcacgtgccgctg
tcgctggagtcgcaggcggaggcgcgcctgttgatgctcgcttccaacaacgtgctttcg
cctgccaccggtcggccgatcatcacccctacccaggacatggtgctcgggtgctactac
ctgacggtcgacaaccccgacgccaccaaaggctccggtaaatacttcggcagcagcgaa
gacgccgtgatcgcctacaaccagggcatgatcgacctgcacgccaagatctggctgcgc
tttgagggcgaggtcgaaaccgacaaccccgaggatttgcgcgtgcgccgtgacgagcag
ggcaacgcgctctcgcagttcgtgcgcaccaccgtcgggcgcatcatcttcaaccaggtc
attcaagaaacgcttgtcgccagctag |