Gloeobacter violaceus: glr4277
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Entry
glr4277 CDS
T00148
Symbol
rpoC1
Name
(GenBank) ORF_ID:glr4277
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gvi
Gloeobacter violaceus
Pathway
gvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
glr4277 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gvi03021
]
glr4277 (rpoC1)
03400 DNA repair and recombination proteins [BR:
gvi03400
]
glr4277 (rpoC1)
Enzymes [BR:
gvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
glr4277 (rpoC1)
Transcription machinery [BR:
gvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
glr4277 (rpoC1)
DNA repair and recombination proteins [BR:
gvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
glr4277 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
BAC92218
UniProt:
Q7NDF8
LinkDB
All DBs
Position
4498067..4499893
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AA seq
608 aa
AA seq
DB search
MPRMEQRFDYIKISIASPERVMAWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPSKDWECYCGKYKRVRHRGIVCERCGVEVTESKVRRHRMGYIKLAAPVTHVWYLKGI
PSYISTLLDMPLRDVEQVVYFNAYVVLNPGNAENLYYKQLLTEDQYIEVEDQIFAEDSSL
ELPEGWAKMGAEAIHELLAAIEMESEAERLRADLGESKGQKRTKLIKRLRVLDNFIATGS
RPEWMVLTAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIV
RNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGR
SVIVVGPKLKLHQCGLPKEMAIELFQPFVIHKLIQRGLVNNIKAAKKMIQRNDARIWSVL
DEVITGHPVLLNRAPTLHRLGIQAFEPILVSGRAIQLHPLVCTAFNADFDGDQMAVHVPL
SLESQAEARLLMLASNNVLSPATGRPIITPTQDMVLGCYYLTVDNPDATKGSGKYFGSSE
DAVIAYNQGMIDLHAKIWLRFEGEVETDNPEDLRVRRDEQGNALSQFVRTTVGRIIFNQV
IQETLVAS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatggaacagcgtttcgactacatcaagatctctattgcctccccggagcgg
gtcatggcctgggggcagcgcaccctccccaacggccaggtcgtcggggaggtgaccaag
cccgagacgatcaactaccgcaccctcaagcccgagatggacgggcttttttgtgagcgc
atcttcgggccttccaaagattgggagtgctactgcggcaaatacaaacgcgtgcgccac
cggggcatcgtctgcgagcgctgcggcgtcgaagtcaccgaatcgaaggtgcgccgccac
cgcatgggctatatcaagctcgccgccccggtcacccacgtctggtacctgaagggcatt
ccttcttatatttcgacgctgctcgacatgcccctgcgcgacgtcgagcaggtggtctat
ttcaacgcctacgtggtgctcaacccgggcaacgccgagaacctctactacaaacagctg
ctcaccgaggaccagtatatcgaggtcgaagatcagatcttcgccgaggattcgagcctg
gaactgcccgaaggttgggcgaagatgggggccgaagcgatccacgaactgctcgcggcc
atcgaaatggagtccgaagccgagcggctgcgcgcagatctgggcgagtcgaaggggcag
aagcgcaccaaactgatcaagcgcctgcgggtgctcgacaacttcatcgccaccggttcg
cggccggagtggatggtactgaccgccatcccggtcatcccgccggatctgagaccgatg
gtgcagctcgacggcggccgttttgccaccagcgacctcaacgacctctaccgccgggtg
atcaaccgcaacaaccgcctcgcgcgtctgcaggagatcctggcgcccgagatcatcgtg
cgcaacgaaaagcgtatgctccaggaggcggtggacgcgctcatcgacaacggccggcgc
ggccggacggtggtcggcgccaacaaccggcccctcaagtcgctctcggacatcatcgag
ggcaagcaggggcgctttcgccagaacctgctcggtaagcgcgtcgactactcgggccgc
tcggtgatcgtggtcggccccaagctcaagctccaccagtgcggcctgcccaaggagatg
gccatcgagctgtttcagccgtttgtcatccacaagctcatccagcgcggactggtcaac
aacatcaaagccgccaaaaagatgatccagcgcaacgacgcgcgcatctggagcgtgctc
gacgaggtgatcaccggccacccggtgctcctcaaccgcgcgcccacgctccaccgcctg
ggtatccaggcgttcgaaccgatcctggtctccggtcgtgccattcagctccatccgctg
gtgtgcacggccttcaacgccgacttcgacggcgatcagatggcggtgcacgtgccgctg
tcgctggagtcgcaggcggaggcgcgcctgttgatgctcgcttccaacaacgtgctttcg
cctgccaccggtcggccgatcatcacccctacccaggacatggtgctcgggtgctactac
ctgacggtcgacaaccccgacgccaccaaaggctccggtaaatacttcggcagcagcgaa
gacgccgtgatcgcctacaaccagggcatgatcgacctgcacgccaagatctggctgcgc
tttgagggcgaggtcgaaaccgacaaccccgaggatttgcgcgtgcgccgtgacgagcag
ggcaacgcgctctcgcagttcgtgcgcaccaccgtcgggcgcatcatcttcaaccaggtc
attcaagaaacgcttgtcgccagctag
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