Galeopterus variegatus (Sunda flying lemur): 103585484
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Entry
103585484 CDS
T08727
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103585484 (HELZ)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
103585484 (HELZ)
3'-5' decay
Other 3'-5' decay factors
103585484 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_5
AAA_16
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
103585484
NCBI-ProteinID:
XP_008564684
LinkDB
All DBs
Position
Unknown
AA seq
1942 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQCSMADFTGPCPSEIERIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDSAFRAVLCCMQLKGKLQPVSTILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHMEDLDDGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVAGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDCDAQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQESRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHGI
SFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNPNKQQQSPPKGKSLHHSQNDH
FQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVS
IGQPQNQHQEKDQHEQNRNGKSDSNNPGPEINKIRTPEKKPTEPKQVDLESNPQNRSPES
RPGVIYPNTKFPRKDNLNPRHVNLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTLL
NQQQSNLPEQPNQMPSQPNQVVQQQNQLHQQTQQPPPQLSPAYQAGPNSAFFNNAVSHRP
QSPPAEAVIPEQQPPPMLQEGHSPLRAVAQPGPILPSHLSNFLEENPPGISIGEAVDRIH
GSVALETLRQQQARLQQWNEHHAYLSQGSIPYPHHHHPHLQHLPQPPIGLHQPPVRADWK
LTSSAEEEAETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQIQTRSPPAVPS
PPSNTDHSSNFSNFSDSSRDIEVANSPAFPQRLPPQIFSSPFSLPSEHLAPPPLKYLAPD
GAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSS
SLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVRTPQDSLAQCKELQDHGNQSSFNFSS
PESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYNVL
QHLGQFPPLMPNKQIAESANSSSQQSSGGSRPAMSYASALRAPPKPRPPPEQAKKSSDPL
SLFQELSLGSSSGSNGFYSYFK
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaacaagcatgtgaatcacttaagaggcag
gactatgaaatggccctcaagcactgcacagaggcgcttctttctctcggccagtgctcc
atggcagacttcacagggccatgtccatcggagatcgagcgcatcaaaatcgagagtctt
ctttacagaattgcctcatttttgcaactgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggagaaggactggccaagggagacagtgcctttcgggcagtgctttgc
tgcatgcagctgaaaggaaagctccagcctgtgtctaccattcttgccaaatcactgaca
ggagagtctctgaatgggatggtaacaaaagatttgacaagactaaaaacacttctcaca
gaaacagagacagcaactagtaacgtcctctctggatatcacatggaagacttagatgac
gggtcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacgattgata
aaattgaaacagcaaaacgagaataaacagctctcaggcagttacatggaaaccctgata
gaaaaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaagtagagcataaccctgacctgtcggttactgtcaacaccaaaaaatctcaccagact
tggacttttgctctcacttgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgacttggaaaagagccttcttatcagataccaaattcctctctctgctgaccag
ctatttacccagtccgttttagacaaatcattgaccaagaccaactatcagtcaaggttg
catgaccttctttatattgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcaattgcagattctagcaagcttcatgctcactggagttgctggaggtgcaaag
tatgctcagaatggacagctttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggtcgactggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagaaaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattgtgacgcacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcattatgcgctagacaggatcaaggacaatggggttttgtttccagacatc
agtatgacacccaccattccttggagtcccaacagacaatgggatgagcagttggatcct
cgcctaaatgcaaagcagaaagaggctgttttggccattaccactccactttcaatccag
ctgccgcctgttctcatcatcggaccctatgggacaggcaaaacattcactctagctcag
gccgtcaaacatatactgcagcaacaggagtctaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccctatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagta
gtgcatcagtactgtttgatctcaagtgcacattccacctttcagatgccacagaaagaa
gatattcttaaacatcgagtggttgttgttacattgaatacttctcagtacctctgtcaa
ttggaccttgaacctgggtttttcacgcacattctgttagacgaagctgcccaggccatg
gagtgtgaaaccattatgcctctagcattagcaactaaaaacactcggattgtcttggct
ggtgatcacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaacctt
cacgtttcattacttgatcgactctatgagcattaccctgccgagttcccatgtaggatc
ctcctatgtgagaactatcgctcccatgaagctatcatcaattacacatctgagcttttc
tatgagggcaaactgatggccagtggaaagcaaccagcacacaaggatttctacccatta
actttctttacagcacgaggggaagatgtacaagaaaaaaatagcacagctttttataat
aatgctgaggtatttgaagtggtggaacgtgtagaagagttaagaaggaagtggccagta
gcatgggggaagttagatgatggcagtattggtgtggtgactccttacgctgatcaagtg
tttaggatacgtgctgaacttcgaaaaaagagattatctgatgttaatgtggaaagggtg
ctaaatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaagacat
acttgtaaacataaacagacaccaattaaaaagaaagagcaacttctggaagattccaca
gaggacttagattatggttttttgtctaactacaagcttctcaatactgccatcacacga
gcacaatccctggttgctgtggtgggtgatcctattgctctgtgctctattggaagatgc
aggaaattttgggaacgatttattgccctgtgtcatgaaaataatagcctacatggaatc
agttttgaacagatcaaggctcagttagaggctttagaactaaagaagacatatgtgttg
aatccactggcacctgaatttatcccccgggctctaagactgcagcattcaggaaatccc
aacaaacagcagcagtcaccacccaaggggaaaagcctccatcatagccagaatgatcat
ttccagaatgatggaattgttcagcccaatccttccgtacttattggcaatcctattaga
gcatatactcctccaccccctcttggacctcatccaaatttgggaaaatctccaagtcct
gttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctatgga
gggaatgtagttatgtcggtgcctttacctgtaccgtggacaggataccagggtaggttt
gcagttgatcctcgaattattacacatcaggcagcaatggcctataatatgaacctatta
cagacacatggacggggatctcctataccttatggccttggacatcacccacctgtcagt
atagggcagccacaaaatcagcatcaggagaaggatcaacatgagcaaaatcgaaatggt
aaaagtgattcaaataatcctggacctgaaattaataagattcgaacaccagagaaaaag
cctacagaaccaaaacaggttgatttggagtcaaatccacagaaccgaagtcctgaatca
cgtcctggtgttatttatcccaataccaaatttcctcgcaaagataatctcaatccaaga
cacgtgaaccttcctcttcctgctccccatgcacagtatgcaatccctaatcgccatttt
catccactaccccagctaccaagaccaccgtttcccattccacagcagcataccttgtta
aatcagcagcagagtaatctgcctgaacaaccaaatcaaatgccatcccagccaaatcag
gtagtccagcagcaaaatcagttgcatcagcagactcagcagccacctcctcagctctct
cctgcatatcaggcaggacccaacagtgctttttttaataatgcagtttcgcatcgacca
cagtctccccctgcagaggctgtgattcctgagcagcagccccctcccatgctgcaagaa
ggccacagccctctgagagccgttgcacagcccggccccattcttccttcgcatctgagt
aacttccttgaggagaaccccccaggaatatctataggggaggctgtagatcgtatacat
gggagtgtagctctggaaacgttaaggcagcagcaagcacggttacagcagtggaatgag
catcatgcctatctgagtcagggcagtattccataccctcaccatcaccatcctcacctc
cagcatcttcctcagccgcccattgggttacatcagccgccagtgagggcagactggaag
ctcaccagcagtgccgaagaggaagcagaaacaacatactcaaggtttcaagatttaatc
agagaactgtctcatcgtgatcaaagtgaaacacgggaacttgctgaaatgccaccacct
caatcaagacttttgcaatatagacaaattcagactaggagcccaccagcagtcccgtct
cccccctccaatacagaccacagtagcaacttttctaactttagtgacagcagcagagac
attgaagtagccaacagcccagcatttccacagcgcctcccgccccagatcttcagctca
cctttctcgttgccatctgagcaccttgcccctcctcccttgaaatacctggcacctgat
ggagcatggacttttgctaacttgcaacagaatcacctaatggggcccggttttccctat
ggcctacctccattgcctcacagaccaccacagaacccttttgtacaaatacaaaatcac
caacatgctattggtcaagagccatttcatccgttgtcatcccgaacagtgtcttcttct
tcgctccctagcctagaagagtatgaacccagaggacctggtcggcccttgtaccaaaga
agaatctcatctagctcagtccagccttgttctgaagaagtaagaactccacaagatagt
ctggctcagtgtaaggagcttcaggaccacggtaaccaatcttctttcaacttttcatcc
ccggagtcctgggtaaacaccacctcatctaccccctatcagaacattccatgcaatgga
tccagcaggacagctcagcccagagagttaatagctccacccaagactgtcaaaccccct
gaggatcaactgaagtctgaaaaccttgaagtgtccagttccttcaactataatgtgctg
cagcatctcggccagtttccacccctcatgcccaacaagcagatcgcggagtcggccaac
agcagtagccagcagagttctggggggagcaggcccgccatgtcttatgccagcgctctg
cgggcccctcccaagcccaggcccccacctgaacaggccaagaagagtagcgaccctctg
tctctgttccaggaacttagcctggggagctcgtcgggcagcaatggcttttattcttat
tttaaataa
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integrated database retrieval system
