Galeopterus variegatus (Sunda flying lemur): 103586172
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Entry
103586172 CDS
T08727
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103586172 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103586172 (EDC4)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103586172 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103586172 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
DUF445
Beta-prop_TEP1_2nd
Beta-prop_THOC3
Beta-prop_HPS5
WD40_Prp19
WD40_CDC20-Fz
WDR55
Motif
Other DBs
NCBI-GeneID:
103586172
NCBI-ProteinID:
XP_008565575
UniProt:
A0ABM0QB34
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSSAYNGDLNGLLDSDPLCSGDGTS
TSKPALRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSASERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNAKIQEEILVHIRQPEGTSLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDALLLFRVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCL
DLSAEYLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRH
TEVLPAEEETDTLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAP
LPTHTAHEDFAFGESRPELGSEGLGSASHGSQPDLRRIVELPAPADFLSLSSETKPKLMT
PDAFMTPSTSLQQITASPSSSSSSSSSSSSSSSSNSSSSLTAVSAMSSTSAVDPSLPRPP
EELTLSPKLQLDGSLTMSSSSSLQGSPRSLLPSLLPGPADKLTPKGAGQVPTAASALSLE
LQEVEPLGLTQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMA
SAASALHLLSPRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEVATPESQVWPTA
PDITRETCSTLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLAS
ASGGFGTKVPTPRLPAKDWKTKGSPRTSPKLKRKSKKDDGDSAVGSRLTEHQVAEPPEDW
PALIWQQQRELAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRWLERALA
EGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTIPPCVSRSLEPMAGQLSNSV
ATKLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSC
QAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAA
TVSSSVRAEVQHQLHMAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAA
GTPVPSAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPP
CPLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLF
QFLQAEPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggcccgcggggggccccagtgcagaaagccagaggccatccagcgcatat
aatggggacctcaatggactcctggactcagaccccctctgctcaggtgatggtacctca
acaagcaagcctgctctccgaaccatgccacccattaacctgcaggagaagcaggtcatt
tgcctctcaggagatgacagctccacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatttccagcaaggcacggggaagcaacaaggtaaaaatc
cagcctgtcgccaagtacgactgggagcagaagtactactatggcaacttgattgctgtg
tctaactcctttttggcctatgccattcgggctgccaacaatggctcagcaatggtgcgg
gtgatcagcgtcagcgcttcggagcggaccttgctcaagggcttcacaggcagcgtggcc
gatctggccttcgcacacctcaactctcctcagctagcctgcctggatgaggcgggcaac
ctctttgtgtggcgcttggctttggttaatgccaaaattcaagaagaaatcttggtccat
atccggcagccagagggcacgtcattgaatcacttccgcaggatcatctggtgccccttc
atccctgaggagagcgaggactgctgtgaggagagcagcccaacggtggccctgctgcat
gaagaccgggctgaggtgtgggacctggatatgctccgctcaagccacagcacctggcct
gtggatgtcagccagatcaagcagggctttattgtggtaaaaggtcacagcacgtgccta
agtgaaggagccctctcccctgatgggactgttctggctactgccagccatgatggctat
gtcaagttctggcagatctacattgagggacaggatgagccaaggtgtctccatgagtgg
aagcctcatgatgggaggcccctttcctgcctcctgttctgtgacaaccataagaaacag
gaccctgatgccttgttgcttttcagggtccctttctggaggtttctcattactggagct
gaccagaatcgggagctaaagatgtggtgcactgtgtcctggacctgcctgcagaccatt
cgcttctccccagatatcttcagctcagtgagtgtgccccccagcctcaaggtttgcttg
gacctctcagcagaatacctgattctcagcgatgtgcaacggaaggtcctctatgtgatg
gagctgctgcagaaccaggaggagggccgtgcctgcttcagctccatctccgagttcctg
ctcacccaccctgtgctgagcttcggtatccaggttgtgagtcgctgccggctgcggcac
actgaagtgctgcctgccgaggaggagactgacactctgggggctgatggtacccatgga
gctggtgccatggagtctgcagctggtgtgctcatcaagctcttttgtgtgcatactaag
gcactgcaggatgtgcagatccgcttccagccacagctgaaccctgatgtggtggctccg
ctccccacccacactgcccatgaggactttgcatttggagaatctcggcctgaactgggc
tccgagggcctggggtcagcctctcatggctcccagcctgacctccgacgcattgtggag
ctgcctgcacccgctgacttcctcagtcttagcagtgagaccaagcccaaactgatgaca
cctgatgccttcatgacacccagcacctccctgcagcagatcaccgcatcccctagtagc
agcagcagcagtagtagcagcagcagcagcagcagcagcagcaacagcagcagctctctt
acagccgtgtctgccatgagcagcacctctgctgtggacccctccttacccaggccacct
gaggagctgaccttgagccccaagctgcagttggatggcagtctgacaatgagcagcagc
agcagcctgcagggaagcccacgcagcctcctgcctagcctgctcccaggcccagctgac
aaattgactcccaagggggccgggcaggtgcctactgctgcctctgcactatccctggag
ctgcaggaagtggagcccctggggttaacccaggcctcccccagccgcacccgctcccct
gatgttatctcctcggcttccactgccctgtcccaggacatccctgagattgcatctgag
gccctgtcccgtggctttggctcctctgctcctgagggccttgagccagacagtatggcc
tcagctgcatcggcgctacacctgctgtccccacggccccgtccagggcctgagcttggc
ccccagcttggcctggatggaggccctggggatggggatcggcatagtaccccctccctc
ctggaggcagccttgacccaggaggttgcaacccctgaaagtcaggtctggcctacggca
cctgacattactcgtgagacatgtagcaccctggcagagagccccaggaatggcctccag
gaaaagcacaagagcctggccttccaccgaccaccttatcacctgctacagcaacatgac
agccaggatgccagtgctgagcaaagtgaccatgatgatgaggtagccagccttgcctct
gcctcaggaggctttggcactaaagttcccaccccacggctgcctgccaaggactggaag
accaagggatcccctcggacctcacccaaactcaagaggaaaagcaagaaggatgacggg
gattcagctgtgggatcccggctcacagagcaccaggtggcagagccccctgaggactgg
ccagcactaatttggcaacagcagagagagctggcagagttgcggcacagccaagaagag
ctgctgcagcgtctgtgtacccaacttgaaggtctgcagagcactgtcacgggccatgta
gaacgtgcccttgagacccggcatgaacaagaacagcggtggctggagcgtgcactggct
gaggggcagcagcggggtgggcagttgcaagagcagctgacacagcagctgtcccaggct
ctatcttcagctgtggctgggaggctggagcgcagcatacgggacgagatcaagaagacg
atccctccatgtgtctccaggagtctggagcccatggcaggccaactaagtaactcagtg
gccaccaagcttacagccgtggagggcagcatgaaagagaacatctccaagctgctcaag
tccaagaacttgacagatgccattgcccgagcagctgcagacacattacaggggccaatg
caggctgcctaccgtgaagccttccagagcgtggttctgccggccttcgagaagagctgc
caagccatgttccagcagatcaatgatagcttccggctgggcacacaggaatacttgcag
cagctagaaagccacatgaagagccggaaggcacgggaacaggaggcgagggagcctgtc
ctggcccagctgcggggcctggtcagcacactgcagagtgccactgagcagatggcagcc
actgtgtccagcagtgttcgggctgaggtgcagcaccagctgcacatggctgtgggcagc
ctgcaggagtcaattttagcacaggtacagcgcattgttaagggtgaggtgagtgtggca
ctcaaggagcagcaagctgccgtcacctccagcatcatgcaggccatgcgctcggctgct
ggcacacctgtcccctctgcccacctcgactgccaggcccagcaagcccatatccttcag
ctgctacagcagggccacctcaatcaggccttccagcaggcactgacagctgctgacctg
aacctggtgctgtatgtgtgtgaaactgtggacccagcccaggtttttgggcagccaccc
tgcccactgtcccagcccgttctcctttccctcatccagcagctggcatctgaccttggc
actcgaactgacctcaagctcagctacctggaagaggcagtgatgcacctggaccacagt
gaccccatcacacgggaccacatgggctccgttatggcccaggtgcgccagaagctcttc
cagttcctgcaggccgagccacacaactcacttggcaaagcagcccggcgtctcagcctc
atgctgcatggccttgtgacccccagcctcccttag
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integrated database retrieval system
