Galeopterus variegatus (Sunda flying lemur): 103586880
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Entry
103586880 CDS
T08727
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103586880 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gvr03021
]
103586880 (PCF11)
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103586880 (PCF11)
Transcription machinery [BR:
gvr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103586880 (PCF11)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103586880 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
103586880
NCBI-ProteinID:
XP_008566448
UniProt:
A0ABM0QDK7
LinkDB
All DBs
Position
Unknown
AA seq
1687 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSMSTSPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPIAVKAPHQVPVQPEKSRPGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLSQSDIKTSKTVSSEKLNSSRQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKLCHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKMDGKDDDV
KEKRKTAEKKDKDEHMKSSEHRLVGSRSKIINGIVQKQDTITEELEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTPLSR
EERNAKRGTKQDIRDPRRMKKTDEERPQENANQHSTKSGTEPKENIENWQSSKSTKRWKS
GWEENKSLQQGDEHSKSPHLRHRESWSSAKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDADKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMI
FEGPNKLSPRIDGPPTPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGG
LRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLL
QQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRF
ESPSVPGGGLRIEGPLGQGGPRFEGCHPLRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQ
PGPQRFDGPPGQQVQTRFDGVPQRFDGPQHQQASRFDIPLGLQGTRYDNHPSQRLDSVSF
NQTGPYSDPPGNAFNAPSQGLQFQRHEQLFDSPQGPNFNGPHGPGNQSFSNPLNRASGHY
FDEKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVAQPVAFGQGQQFLPVHPQNPGAFV
QNPSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVASQPTPEEEED
QNEDQDVPDLTNFTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQ
NRTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKE
FQSVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSF
DCTPSPSKTPVENPLNIMLNIVKNELQEPCDSPKVKEEQIDTPPACTEESITPSTEVKTE
NDTVESV
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcgctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatt
gtgaaaaacgttggaagagagtatctcactgcatttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaggaaccttcaacacctggcacagtggtc
agttcccccagcatgtccacttctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaataaggcagcaattactggcaaagcaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
caacaggagacatccaacttaggtcctggatctgcaccatccaaattacatgtttcgcaa
attccccctattgcagttaaagctccccatcaggttcctgtgcaacctgagaaaagccgt
ccaggtccatccttacaaattcaggatttgaaaggaactaatcgggatccccgtcttaac
aggatgagccaacattcttctcacggaaaagatcagagtcacaggaaagaattcctaatg
aacacattgagccaatctgatattaagacaagtaaaactgtatcctctgaaaaactaaat
tcatccaggcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccag
ttagattctaaatctaaatctaaatctaaatcaccatcacctttaaaaaacaaattatgc
catacaaaagacttgaagaatcaagaatctgaaagtatgaggttgtctgatatgaacaag
agagatccaagattaaaaaaacatcttcaggataagatggatggcaaagatgatgatgta
aaagagaagagaaaaacggcagaaaaaaaggataaagatgagcacatgaaatcatctgaa
cacagactggttggaagtagaagtaaaatcataaatggcattgtacaaaaacaggataca
ataacagaagaattggaaaaacaggggacaaagccagggagatcaagtactagaaagcgg
tcaagatcacgatcacccaagtctcggtcaccaattatacattcccccaagagaagagat
aggcggtcacccaaacgaaggcaaaggagtatgtctccaacttccacacccaaagctgga
aagattcgccagtcaggagttaagcagtcacatatggaagagtttacaccactttccagg
gaagaaagaaatgctaagagaggtactaaacaggatattcgagatccaaggagaatgaaa
aagactgatgaggaacgaccacaagaaaatgcaaatcaacattctacaaagtcaggcact
gaacctaaggagaatatagaaaattggcaaagttccaagtctaccaaaagatggaaatct
ggttgggaagaaaataaaagtttacaacagggtgatgagcatagcaaatctcctcatcta
aggcatagggagagctggtcaagcgctaaaggaatcttgtcacctcgagctccaaagcag
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgggaagagcagagatctccattcaatgat
cgttttccacttaagcgacctagatatgaagatgcagataaaccatttgtagatagccca
gcgtcaagattcgccggccttgatacaaatcagcgtcttacggctttagccgaagataga
ccgttatttgatggacctagtaggccatcggtaacgagggatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcctacaccaggttctctt
cggtttgatgggtcaccaggacaaatggggggaggaggtcctttgagatttgaaggacca
caaggtcagctaggaggtgggtgtccattgagatttgaaggtcctccaggaccagtaggg
acgcccctgcggtttgaagggccaattggtcaggcaggaggaggaggaggttttcggttt
gaaggttcccctggcctgagatttgagggatctgcaggtggcttgcgatttgaaggacca
gggggccagcctgtgggtggtctgaggtttgagggacatcgtggtcaacctgtgggtggt
ctgaggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccga
ggccagcctgtaggtggacttagatttgaggggggtcatggtccatcaggggctgcaatt
aggtttgatggacctcatggtcagccaggaggtgggatcagatttgagggccctttgtta
cagcaaggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgaga
tttgaaggacaacataatcagctcggtgggaaccttagatttgagggtccacatggtcaa
ccaggggttggcatcaggtttgaaggaccgttagtccaacaaggaggtggaatgaggttt
gagagtccttctgtaccaggaggtggcctgagaattgaaggacctctgggtcaaggtggt
ccaagatttgaaggctgtcatcctttaaggtttgatgggcagccaggtcagccatcactc
ttgccaagatttgatgggttacatggtcagccaggtcctagatttgaaagaaccggtcag
ccaggcccacagagatttgatggacctcctggacagcaggttcaaacaagatttgatggt
gtacctcaaagatttgatggtccacaacaccagcaagcatcaaggtttgatattcctctt
ggtcttcaaggcacacgatatgacaatcatccttcacaaaggcttgattcagtatctttc
aatcagactggtccttatagtgacccacctggtaatgcttttaatgccccctctcaagga
ctacagtttcaaagacatgaacaattatttgattcacctcaaggaccaaattttaatgga
ccacatggccctggaaaccagagtttctcaaatccccttaacagagcttctggacactat
tttgatgagaagaatcttcagagttctcagtttggaaactttggcaatttacctgctcca
ataacagtaggcaatattcaggcatcacaacaggttctgactggtgttgctcagccagta
gcatttggccaaggacaacagtttttaccagtacatccacagaatcctggagcatttgtt
cagaatccttcaggagcccttcctaaggcatatcctgataatcatctcagtcaagtggat
gtcaatgaattgttttcaaaactgctaaaaacaggaattctcaaattgtcccagcctgat
tcagctacaacacaagtaaatgaagttgcttctcagcctacccctgaagaggaggaagat
caaaatgaagatcaagatgttccagatcttacaaattttacagttgaagagttgaaacag
cgttatgatagtgttataaatcgactctacactggtattcagtgttattcttgtggaatg
aggtttacaacatcacagactgatgtatatgctgatcacttggactggcattatcggcaa
aatagaactgaaaaagatgttagcagaaaagtcactcatagacgttggtactacagttta
acagactggatagaatttgaggaaatagctgatctggaagaacgtgcaaagagccagttt
tttgaaaaggtgcatgaagaagtcgtcctcaaaactcaggaggcggctaaagaaaaggag
ttccaaagtgtacctgctggaccagctggagcagttgagagttgtgagatctgtcaagaa
caatttgaacaatactgggatgaagaggaggaggaatggcatttaaaaaatgctattaga
gtagatggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcattt
gattgtacaccgtctcccagcaagacaccagttgaaaaccccttgaatattatgttgaac
attgtcaaaaacgaattgcaggaaccctgtgacagtcccaaagttaaggaagaacaaatt
gataccccaccagcttgtacagaggaaagcataacaccatccactgaagttaaaacagaa
aatgatacagtcgagtcagtttaa
DBGET
integrated database retrieval system
