Galeopterus variegatus (Sunda flying lemur): 103589614
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Entry
103589614 CDS
T08727
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03440
Homologous recombination
gvr03450
Non-homologous end-joining
gvr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103589614 (RAD50)
03450 Non-homologous end-joining
103589614 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
103589614 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gvr03032
]
103589614 (RAD50)
03400 DNA repair and recombination proteins [BR:
gvr03400
]
103589614 (RAD50)
DNA replication proteins [BR:
gvr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103589614 (RAD50)
DNA repair and recombination proteins [BR:
gvr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103589614 (RAD50)
BRCA1-C complex
103589614 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
103589614 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
Crescentin
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
103589614
NCBI-ProteinID:
XP_008569865
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDQEMISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQIISKEDQLKSSKEI
VKSYENELDPLKNRLKEIEHSLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKEKRLVDCQRELEKLNKESRLINQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQALAIQLELDGFERGPFSERQIKNFHKLVRERQERETETANQLMNDFAE
KETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTARTQMEM
LIKDKADRDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKLKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDICGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITLLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEEGAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTIQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQRLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTDVQS
LYREIKDAKEQVSPLETTLEKFQQEKEELINKKITSNKIAQDKLNDIKEKVKNIHGYVKD
IENYIQDGKDDYKKQKETELNRVIAQLSECEKHKEKINEEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNVKRNHSLALGRQKG
YEEEIIRFKKELREPLFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagtcccctcacaattttggttggacccaatggggct
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacgtttgttcatgatcccaaggttgctcaagaaaccgatgttagggcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttgtagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggcgaaaaggtcagtctcagctctaagtgtgcagaaattgaccaagaaatg
ataagttctcttggggtttccaaggctgtcctaaataatgtcattttctgtcaccaagaa
gattctaattggcctttaagtgaaggaaaggctctgaagcaaaagtttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacacttcggcaagtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaataaggaaaaagct
tgtgagattcgtgatcagattattagtaaagaagaccagttgaaatcttcaaaggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacac
agtctctccaaaataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
caaatggaaaaagataatagtgaattggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgacttatatcacaatcaccagagaacagtaagggagaaagaaaag
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttatcaat
caagaaaaatcagaactacttgttgaacagggtcgtctacagttacaagcagatcgtcat
caagaacatatccgagctagagactcattaattcaggctttggcaatacagctagaattg
gatgggtttgagcgtggaccattcagtgaaagacagattaaaaacttccacaaacttgtg
agagagagacaagaaagggaaacagaaactgccaatcaactgatgaatgactttgcagaa
aaagagactctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagttgaaaaatgtg
aagtacgaattacagcagttggaaggatcttcagacaggattcttgaactggaccaagag
ctcacaaaagctgagcgggagctaagcaaggctgaaaaaaacagcaatgtagaaacccta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggactctgcgtaaa
ttggaccaggaaatggagcagttaaatcatcatacgacagcacgtacccaaatggagatg
ctgatcaaagacaaagctgacagagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaacttcgctgttggggtattttcccaacaaaaaacaacttgaagactggctt
catagtaaattaaaagaaattaatcagaccagggacagacttgccaaattgaacaaggaa
ctagcttcagcagaacaaaataaaaatcatataaataatgagctaaaaagaaaggaagag
cagttgtccagttatgaagacaagctgtttgatatttgtggtagccaggattttgaaagt
gatttagacaggcttaaagaggagattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacggcagtttactcccaattcattactctgctaacagatgaaaatcagtcctgt
tgccctgtttgtcagcgagtttttcagacagaggctgaattacaagaagtcatcagtgat
ttgcaatctaagctgcggcttgctccagataaactcaagtcaacagaatcagagctaaag
aaaaaagagaagcgacgtgatgagatgctgggacttgtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaacgtcaatagagac
atacagcgcctaaagaatgacatagaagaacaggaaacactcttgggtacaataatgcct
gaagaagaaggtgctaaagtatgtctgacagatgttacaattatggagcgatttcagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagccaagcttcaaggaatagac
ttagatcgaactattcagcaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagatcgaattgaatcgtaagcttatacaggaccagcaggaacagatt
cagcgcctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatccactaat
ttgcaacgtcgtcagcaactggaggagcagactgtggaattatccactgacgttcaatct
ttgtatagagagataaaggatgctaaagagcaggtaagccctttggaaacaacactggaa
aagttccagcaggaaaaggaagaattaatcaacaaaaaaattacaagcaacaaaatagca
caggataaactaaatgatatcaaagagaaggttaagaatattcatggttatgtgaaagac
attgaaaattatattcaagatgggaaagatgactataagaagcaaaaagaaactgaactt
aatagagtaatagctcaactaagtgaatgtgagaaacacaaagaaaagataaatgaagaa
atgggaattatgagacaagatattgatacacaaaagatacaagaaagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttgcaaatgaaaaatgaacatcagaagttg
gaagagaacatagacaatgtaaaaagaaatcacagtttggcattagggcgacagaaaggt
tatgaggaagaaattattcgttttaagaaagaacttagagaacctttatttcgggatgct
gaggaaaagtatagagaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagactcttgaccaagccataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaattattcgtgatctttggcgaagtacctatcgtggacaagatatt
gaatatatagaaattcggtctgatgctgatgaaaatgtatcagcttctgataaaaggcgg
aattataactatcgagtcgtgatgttaaagggagacacagccttagatatgcgaggacga
tgcagtgctggacaaaaggttttagcctctctcattattcgcctggccctagccgaaacg
ttctgcctgaactgtggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacattgaatctctcgcacacgctctggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtaatcactcacgatgaagattttgtggagcttttaggacgttct
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
aaatgcagtgttagctccctagggtcttacgttcattaa
DBGET
integrated database retrieval system
