Galeopterus variegatus (Sunda flying lemur): 103589616
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Entry
103589616 CDS
T08727
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr04151
PI3K-Akt signaling pathway
gvr04510
Focal adhesion
gvr04512
ECM-receptor interaction
gvr04611
Platelet activation
gvr04820
Cytoskeleton in muscle cells
gvr04926
Relaxin signaling pathway
gvr04933
AGE-RAGE signaling pathway in diabetic complications
gvr04974
Protein digestion and absorption
gvr05146
Amoebiasis
gvr05165
Human papillomavirus infection
gvr05205
Proteoglycans in cancer
gvr05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103589616 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103589616 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103589616 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103589616 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103589616 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
103589616 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
103589616 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
103589616 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103589616 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
103589616 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
103589616 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103589616 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gvr00536
]
103589616 (COL1A2)
Glycosaminoglycan binding proteins [BR:
gvr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103589616 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
103589616
NCBI-ProteinID:
XP_008569871
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQEGTAKKGPAGDRGPRGERGPPGSPGRDGEDGPPG
PPGPPGLPGPPGLGGNFAAQYDAKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEP
GEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIR
GHNGLDGLKGQPGAAGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPGGARGSDGSV
GPVGPAGPIGAAGPPGFPGAPGPKGEIGPVGNPGPSGPAGPRGEVGLPGLSGPVGPPGNP
GANGLAGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNK
GEPGSAGPQGPPGPSGEEGKRGPNGESGSAGPTGPPGLRGSPGSRGLPGADGRSGVMGPP
GSRGATGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPAGLPGIDGRPGPI
GPAGARGEPGNIGFPGPKGPSGEPGKVGDKGHPGLAGPRGAPGPDGNNGAQGPPGLQGVQ
GGKGEQGPAGPPGFQGLPGPAGTTGEAGKPGERGLHGEFGLPGPAGPRGERGPPGQSGAA
GPPGPIGSRGPSGPPGPDGNKGEPGVVGAAGTAGPSGPSGLPGERGAAGVPGGKGEKGET
GLRGEVGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPSGPAGPRGSPGERGEVGPA
GPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPSGPNGPPGPAGIRGDG
GPPGVTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGAVGLP
GFAGEKGPSGEPGTAGPPGTPGPQGQLGTPGILGLPGSRGERGLPGVAGAVGEPGPLGIS
GPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNIGPTGTV
GAPGPQGSVGPAGKHGNRGEPGPVGPVGPVGSVGPRGPSGPQGIRGDKGEPGDKGPRGLP
GLKGHGGLQGLPGLAGQHGDQGPPGTVGPAGPRGPAGPSGPAGKDGRTGHPGAVGPAGIR
GSQGNQGPAGPPGPPGPPGPPGVSGGGYDFGYDGDFYRADQPRSPPSLRPKDYEVDATLK
SLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTG
ETCIRAQPENIPAKNWYRSSKANKYVWLGETINGGTQFEYNVEGVSSKEMATQLAFMRLL
ANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKK
TNEWGKTIIEYKTNKPSRLPFLDIATLDIGGADQEFIVDVGPACFK
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatctttacaagagggaactgccaaaaagggcccagctggagatagaggacca
cgtggagaaaggggtccaccaggctccccaggcagagatggtgaagatggtcccccaggc
cctccaggtccacctggtcttcctggcccccctggtctcggtgggaactttgctgctcag
tatgatgcaaaaggagttggacttggccctggaccaatgggtttaatgggacctagaggc
cctcctggtgcagctggagcccctggccctcaaggtttccaaggacctgctggtgaacct
ggtgaacctggtcaaactggtcctgctggtgctcgtggtccacctggccctcctggcaaa
gctggtgaagatggtcaccctggaaaacctggacgacctggtgagagaggagttgttgga
ccacagggtgctcgtggtttccctggaactcctggacttcctggcttcaagggcattagg
ggacacaatggtctggacggattgaagggacagcctggtgcagcaggtgtgaagggtgag
cctggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcctggt
gagagaggacgtgttggtgcccctggcccaggtggtgctcgtggcagtgatggaagtgtg
ggtcctgtgggtccagctggccccattggtgctgctggccctccaggcttcccaggcgcc
cctggtcccaagggtgaaattggacctgtgggtaaccctggcccctctggtcccgcgggt
ccccgtggtgaagtgggtcttccaggtctgtctggccctgtgggacctcctggtaaccct
ggagcaaatggccttgctggtgccaagggtgctgctggccttcctggtgtggctggggct
cctggcctccctggaccccgtggtattcctgggcctgttggagctgctggtgctactggt
gccagaggacttgttggagagcctggtccagctggctccaaaggagagagcggcaacaag
ggtgagcctggctctgctgggccccaaggtcctcctggtcccagtggtgaagaaggcaaa
agaggtcccaatggagaatctggatctgctggccccacaggacctcctgggctgagaggc
agtcctggttctcgtggtcttcctggagctgacggcagatctggtgtcatgggccctcct
ggtagtcgtggtgcaactggtcctgctggcgtccgaggccccaatggagatgctggtcgt
cctggggagcctggtctcatgggaccccgaggtcttcccggttcccctggaaatgttggc
ccagctggcaaagaaggtcctgcaggcctccctggtattgacggcaggcctggcccaatc
ggccccgctggtgcaagaggagaacctggcaacatcggattccctggccccaaaggcccc
agtggtgagcctggcaaagttggtgataaaggtcatcctggtcttgctggtcctcggggt
gctccaggtcctgacggaaacaatggtgctcagggacctcctggactacaaggtgtccaa
ggtggaaaaggtgaacagggtcctgctggtcctccaggctttcagggtctgcctggccct
gcaggtacaactggtgaagctggcaaaccaggagaaaggggcctccatggtgagttcggt
cttcctggtcctgctggtccaagaggggaacgtggtcccccaggccagagtggtgctgct
ggtcctcctggtcctattggaagccgaggtccttctggacccccagggcctgatggaaac
aagggtgaacctggtgtggttggtgctgcgggcactgccggtccctctggtcctagtgga
ctcccaggagagaggggtgctgcaggtgtacctggaggcaagggagaaaagggtgaaact
ggtctcagaggtgaagttggtaaccctggcagagatggtgctcgtggtgctcctggggct
gtaggtgcccctggtcctgctggagccacaggtgaccggggtgaagctggtgctgctggt
ccttctggtcctgctggtcctcggggtagccctggtgaacgtggtgaggttggtcctgct
ggccccaatggatttgctggtcccgctggtgctgctggtcaacctggtgctaaaggagag
agaggagccaaagggcctaagggtgaaaatggcgtggttggtcccacaggccccgttgga
gctgctggcccatctggtccaaatggcccccctggtcctgctggaattcgtggtgatgga
ggtcctcctggtgttactggcttccctggtgctgctggacggactggtcctcctggacct
agtggtattactggtcctcctggtccccctggtgctgctggtaaagaagggcttcgtggt
cctcgtggtgaccaaggtccagttggccgaactggagaaacaggcgcagttggcctccct
ggttttgctggtgaaaagggtccctctggagagcctggtactgctggacctcctggtacc
ccaggtcctcagggtcaacttggcactcctggtattctgggtctccctggctctcgaggt
gaacgtggtctacctggtgttgctggtgctgtgggtgaacctggtcctcttggcatctca
ggccctcctggggcccgtggtccccctggagctgtgggtagtcctggagtcaatggtgct
cctggtgaagctggtcgtgatggcaaccctgggagtgatggtcccccaggtcgtgatggt
caacctggacacaagggagaacgtggctaccctggcaacattggtcccactggcactgtg
ggtgcacctggtcctcaaggctctgtgggtcctgctggcaaacatggaaaccgtggtgaa
cctggtcctgtgggtcccgttggtcctgtcggttctgttggtccaagaggtcctagtggc
ccacaaggcattcgaggtgataagggagagcctggtgacaaggggcccagaggtcttcct
ggcttaaaaggacacggcggattgcagggtcttcccggtctcgctggtcagcatggtgat
caaggtcctcctggcactgtgggtcccgctggtcctaggggccctgccggtccttctggc
cctgctggcaaagatggtcgcactggacatcccggcgcagttggacctgctggcattcga
ggctctcagggtaaccaaggtcctgctggccctcctggtccccctggccctcctgggcct
cccggtgtcagtggtggcggttacgactttggttatgatggagacttctacagggctgac
cagcctcgctcaccaccttctctcagacccaaggattatgaagttgatgcaactctgaaa
tctctcaacaaccagattgagacccttcttactcctgaaggctctaggaagaacccagct
cgcacatgccgtgacttgagactcagccacccagagtggagcagcggttactactggatt
gaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctactggt
gaaacctgcatccgagcccaacctgaaaacatcccagccaagaactggtacaggagctcc
aaggccaacaaatacgtctggttaggagaaactattaatggtggtacccagtttgaatat
aatgtagaaggagtgagctccaaggaaatggctacccaacttgccttcatgcgcctgctg
gccaaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcatacatggat
gaggagactggcaacctgaagaaggctgtcattctgcaaggctccaatgatgttgaactt
gttgccgagggcaacagcaggttcacttacaccgttcttgtagatggctgctctaaaaag
acaaatgaatggggaaagacaatcatcgaatacaaaacaaataagccatctcgcctgccc
ttccttgatattgcaaccttggacattggcggtgctgaccaagaattcattgtggacgtt
ggcccagcctgtttcaaataa
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