Galeopterus variegatus (Sunda flying lemur): 103589628
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Entry
103589628 CDS
T08727
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr01524
Platinum drug resistance
gvr03430
Mismatch repair
gvr05200
Pathways in cancer
gvr05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103589628 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103589628 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
103589628 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
103589628 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gvr03400
]
103589628 (MSH6)
DNA repair and recombination proteins [BR:
gvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103589628 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
Gp44_lid
UPF0524
Motif
Other DBs
NCBI-GeneID:
103589628
NCBI-ProteinID:
XP_008569880
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MEGYPWWPCLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEA
QKGGHFYSAKPEILRAMQRADEALNKDKIKRLELAVCDEPSEAEEEEEMEVGATYASDKS
EEDNEIESEEEVQPKVQGSRRSSRQIKKRRVISDSESDIGGSDVEFKPDAKEDGSSDEIS
SGVGDSESEGLDSPVKVARKRKRMVTGNGSLKKKSSRKEMSSATKRATGILSETKSTLSA
FSAPQNSESQANVSGGGDDSSRPAVWYHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVP
EDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLVFMKGNWAHS
GFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKHDRVVRREICRIITK
GTQTYSVLEGDPSENYSRYLLSLKEKEEDSSGHNRVYGVCFVDTSLGKFYVGQFSDDRHC
SRFRTLVAHYPPVQVLFEKGNLSMETKTILKGSLSCSLQEGLIPGSQFWDAAKTLRTLLE
EGYFMEKLNEDSGVMLPQVLKEMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQE
LLSMANFEEYIPLDSDMVSTTRPGAVFTKANQRMVLDAVTLNNLEIFLNSTNGSTEGTLL
ERIDTCYTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKISEVVDLLKKLPDLE
RLLSKIHNVGSPLKSQNHPDSRAVMYEETTYSKKKIIDFLSALEGFKVMCKIIEIMEEVI
DDFKSKILRQIVTLQTKNPEGHFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQ
ALADIRENEQSLLEYLETQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKST
KKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECMAVLDV
LLCLTNYSRGGDGPMCRPVILLPGEDILPFLELKGSRHPCITKTFFGDDFIPNDILIGCE
EEEEETSKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEGCRLTPIDRVFTRLG
ASDRIMTGESTFFVELSETASILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAET
IKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSY
GFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLFREVCLASERSTVDAEAVHKLLTLIK
EL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggagggttacccctggtggccttgcctggtttacaaccacccctttgatggaacattc
atccgtgagaaagggaaatcagtccgcgttcatgtacagttttttgatgacagcccaaca
aggggctgggttagcaaaaggctgttaaagccatatacaggttcaaaatcgaaggaagcc
cagaagggaggtcatttttacagtgcaaagcctgaaatactcagagcaatgcaacgtgca
gatgaagccttgaataaagacaagattaagaggcttgaattggcagtgtgtgatgagcca
tcagaggcagaagaggaggaagagatggaggtaggtgcgacttatgcatcagataagagt
gaagaagataatgaaattgagagtgaagaggaggtacaacctaaggtacaaggatctagg
cgaagtagccgccaaataaaaaaacgaagagtgatatcagactctgagagtgacatcggt
ggctctgatgtggagttcaagccagatgctaaggaggatggaagcagtgatgagataagc
agcggagtgggggatagtgagagtgaaggactggacagccctgtcaaagttgctcgaaag
cggaagagaatggtgactggaaatggctctcttaaaaagaaaagttcaaggaaggaaatg
tcctcagccaccaaacgagcaactggcattttgtcagaaaccaagagtactttgagtgct
ttttctgcccctcaaaattctgaatcccaagcaaacgttagtggaggaggtgatgacagt
agtcgccccgctgtctggtatcatgaaactttggaatggcttaaaaaggaaaagagacga
gatgagcaccggaggcggcctgatcacccagattttgacgcatccacactgtatgtgcct
gaagatttccttaattcttgtactcctgggatgaggaagtggtggcagattaagtctcag
aactttgatcttgtcatcttttataaggtagggaagttctatgaactctaccacatggat
gctcttattggagtcagtgaactggggttggtattcatgaaaggcaactgggcccattct
ggttttcctgaaattgcatttggccgatattcagactccctggtacagaagggctacaaa
gtagcacgagtggaacagactgagaccccggaaatgatggaggcacgatgccgaaagatg
gcacatatatctaagcatgatagagtggtgaggagggagatctgtaggattattaccaag
ggtacacagacctacagtgtgctggaaggtgacccctctgagaactacagtaggtatctt
cttagcctcaaagaaaaagaggaagattcttctggccacaatcgtgtgtatggtgtgtgc
tttgttgatacttcattgggaaagttttatgtaggtcagttttcagatgatcgccattgt
tccagatttaggactctagtggcacactatcctccggtacaagtcttgtttgagaaagga
aatctctcaatggaaacaaagacaattctgaagggttcattatcctgttctcttcaggaa
ggtctgataccaggctcccaattttgggatgcagccaaaactttgagaacgctccttgaa
gaaggatattttatggaaaagctgaatgaggacagtggggtgatgttaccccaggtgctt
aaagagatgacctcagagtccgattccattgggttgacaccaggagagaagagtgaactg
gccctctctgctctaggtggttgtgttttttacctcaaaaaatgccttattgatcaagag
cttttatcaatggctaattttgaagaatatattcccttggattctgacatggtcagtact
acaagacctggtgctgtcttcactaaagccaatcaacgaatggtgctagatgcagtgaca
ttaaacaacttggagatttttctgaatagcactaatggctctactgaagggaccctgcta
gagaggattgatacttgctatactccctttggtaaacggctcctaaagcaatggctttgt
gcgccactctgtagcccttacgctatcaatgatcgtctagatgccatagaagacctcatg
gttgtgcctgacaaaatctctgaagttgtagaccttctaaagaaacttccagatcttgag
aggctactgagtaaaattcataatgttgggtctcccctgaagagccagaaccacccagat
agcagagctgtaatgtatgaagaaactacatacagcaaaaaaaagattattgattttctt
tctgctctggaaggattcaaagtaatgtgcaaaattatagagattatggaagaagtcatt
gatgattttaagtctaaaatccttaggcagattgttacactgcagacaaaaaatcctgaa
ggccattttcctgatttgactacagaactgaaccgatgggatacagcctttgaccatgaa
aaggctcgaaagactggactgattactcccaaagcaggatttgactctgattatgaccaa
gctcttgctgacataagagaaaatgagcagagcctcctggaatacttagagacacagcgc
aatagaattggctgtaggaccatagtctattggggaattggcaggaaccgttaccagttg
gaaattccagagaatttcaccacccgtaatttgccagaagagtatgagttgaaatcaact
aagaagggctgtaaacgatattggaccaaaactattgagaagaagttggctaatctgata
aatgctgaagaacggagagatgtatcattgaaggactgcatgcggcgactgttctataac
tttgataaaaattacaaggactggcagtctgcagtagagtgtatggcagtgttggatgtc
ttattgtgcctgactaactatagtcgagggggtgacggtcctatgtgtcgtcccgtaatt
ctgttgccaggagaagatattctccccttcttagagcttaaaggatcacgccatccctgc
attacaaagaccttttttggagatgattttattcctaatgacattctaataggctgtgag
gaagaagaggaagaaactagcaaagcctattgtgtgctcgttactggaccgaatatgggg
ggcaagtctacactcatgagacaggctggtctattagctgtaatggcccagatgggttgt
tatgtacctgctgaagggtgtaggctgacgcccattgacagagtgtttactagactcggt
gcctctgatagaataatgacaggtgaaagtacattctttgttgaactgagtgaaactgcc
agcatacttatgcatgcaacagcacattcactggtacttgtcgatgaattaggaagaggt
actgcaacatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagact
ataaagtgtcgtacgttgttttctacccattaccattcattagtagaagattattctcaa
aatgttgctgtgcgcctaggacatatggcatgcatggtagaaaatgaatgtgaagacccc
agccaggagactattaccttcctctataaattcattaaaggagcttgtcctaagagctat
ggctttaatgcagcaaggcttgctaatcttccagaggaagttattcagaagggacacaga
aaagcaagagaatttgagaagatgaatcagtcactacgattatttcgggaagtttgcctg
gctagtgaaaggtcgactgtagatgctgaagctgtccataagttgctgactttaattaag
gaattatag
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