Galeopterus variegatus (Sunda flying lemur): 103590396
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Entry
103590396 CDS
T08727
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103590396 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gvr03400
]
103590396 (LIG3)
Enzymes [BR:
gvr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103590396 (LIG3)
DNA repair and recombination proteins [BR:
gvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
103590396 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
103590396
NCBI-ProteinID:
XP_008570835
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MTLAFRILFQQTLRALGRKEPCLFREQHRWANVRQFSQWSETDLLHRCRLLQRRKPVLSF
QGGCLRPRATSLVFLPGSHVELCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGMCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQ
HIADLSSKASSTPKKKAVVQAKLTTTGQVTSPMKGTSFVTNTNPRKFSGFSAKPNNCGEA
PSSPTRKISLSSSKCDPRHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKKPGRRQTLSVQASLMT
PVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVA
HFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCAGGHDDATLARLQKELDMVKISKSHCEERGFKPVSAWEQPRTASFLLQDP
SKIPNWLKINKIYYPDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDK
DWKSATDLPQLKELYQLSKEKADFTVVAGDEGSSTTGGSSGENEGTLGSAVSRKAPRGSP
NKPSAGAKKAEGKLSNANSKGNMLTAKPSPVKVGEKLSTKSSPVKVGKKRKAADETPCQT
KVKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDLASATHVLGSRDKNPEAQ
QVSPEWIWACIRKRRLVAPC
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaggatcctcttccaacaaaccctccgtgcacttggccgaaaagaa
ccgtgcctattccgagaacaacatcgctgggctaatgtaagacaattcagccagtggtca
gaaacagatctacttcatcggtgccgcctcctccagagaagaaagcctgttctatcattc
cagggaggctgtctaagaccacgtgccaccagccttgttttcttgccaggatcgcatgtg
gaactgtgcagtggcccctgtgagatggctgagcaacggttctgtgtggactatgccaag
cgtggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggcatgtgccgaatt
ggcaaagtggtgcccaatcccttctcagagtctgggggtgatatgaaagagtggtaccat
attaaatgcatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaagac
ctcacagagctggaaggctgggaagagctggaagataatgagaaggaacagataacccag
cacattgcagatttgtcatctaaggcatcaagcacaccaaagaagaaagctgttgttcag
gctaaattgacaaccactggccaagtgacatctccaatgaaaggcacctcatttgtcacc
aataccaatccccggaaattttctggcttttcagccaagcccaacaactgtggagaagcc
ccctcaagccctacccgtaagataagtctgtcctcaagcaaatgtgaccccaggcacaag
gattgtctgctaagggagtttcggaagttatgcgccatggttgctgataatcctagctac
aatacaaagacacagatcatccaggacttcctgcggaaaggctcagcaggagatggtttc
cacggtgatgtgtacctaacagtgaagctgctcctgccaggtgtcattaagagtgtttac
aacttgaatgataagcagatcgtgaagcttttcagccgcatttttaactgcaacccagat
gacatggcacgggacctagagcagggtgacgtgtcagagacaatcagagtcttctttgag
cagagcaagtcttttcctccagctgccaagagcctccttaccatccaggaagtggatgaa
ttcctcctgcggctctccaagctcaccaaggaggatgagcagcaacaggcgctgcaggac
attgcctccaggtgtacagccaatgaccttaaatgcatcatcagattgatcaaacatgat
ctgaagatgaactctggtgcaaaacatgtgttagatgcgctcgatcccaatgcctatgaa
gccttcaaagcctcacgcaacctgcaggatgtggtggaacgggtccttcgcaacgagcag
gaggtggagaagaagccaggccggagacagactctgagtgttcaggcctcgctgatgaca
cccgtgcagccaatgctggccgaggcctgcaagtccatcgagtatgccatgaagaagtgt
cctaacggcatgttctctgagatcaagtatgatggtgagcgagtccaggtacataagaac
ggggaccacttcagctacttcagccgcagtctcaagcccgtcctgcctcacaaggtggca
cactttaaagactacatccctcaggcttttcctgggggccacagtatgatcttggactct
gaggtgctcctgattgacaacaagacaggcaaaccactgccatttgggactttgggagtg
cacaagaaagctgctttccaagatgctaatgtctgcctgtttgtttttgactgtatctac
ttcaatgatgtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgac
aacatggttgaaattcccaaccggatcatgttctcagaaatgaagcaagtcacaaaagct
tcagacttggctgacatgataaaccgagtgatccgggaggggctggaagggctggtgctg
aaggatgtgaagggtacatatgaacctggaaagcggcactggctaaaagtaaagaaagac
tatttgaacgagggggccatggctgacacagctgacctggtggtccttggagccttctat
gggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccaagc
agccagaagtggtgcacagtcaccaagtgcgcaggaggccatgatgatgcaacgctcgcc
cgcctgcagaaggaactggacatggtaaaaatcagcaagtcccattgtgaagagaggggg
tttaagccggtttcagcttgggaacagcccagaacagcatcttttctccttcaggatccc
agcaaaatacccaactggctgaagatcaataagatctactaccctgacttcatcgttcca
gacccaaagaaagctgccgtgtgggagatcacaggtgctgaattctccaaatctgaggct
cacacagctgatggtatctccatccggtttcctcgttgcactcgaatccgtgacgataag
gactggaagtctgccactgatctcccgcaactcaaggaactataccagctgtctaaggag
aaggcagacttcactgtagtggctggagatgaggggagctccactacagggggcagcagt
ggagagaacgagggcaccttggggtctgctgtgtcccgcaaggcccccagaggttccccc
aacaagccctccgctggtgccaagaaggcagaaggaaagttaagtaacgccaacagcaaa
ggcaacatgctgactgcaaagccttcccctgtgaaagtgggagagaagctgtccacaaag
tcttctccagtgaaagtggggaagaagcgcaaagctgctgatgagaccccgtgccaaaca
aaggtgaaggtgctgctggacatcttcactggggtgcggctctatttgccaccctccaca
ccagacttcagccgtctcagacgctactttgtggcattcgacggggacctggtacaggaa
tttgacctggcctcagccacacatgtgctgggcagcagggacaagaaccctgaggcccag
caggtgtccccagaatggatttgggcatgtatccggaaacggagactagtagctccctgc
tag
DBGET
integrated database retrieval system
