Galeopterus variegatus (Sunda flying lemur): 103592577
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Entry
103592577 CDS
T08727
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03250
Viral life cycle - HIV-1
gvr04623
Cytosolic DNA-sensing pathway
gvr05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103592577 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103592577 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
103592577 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gvr03400
]
103592577 (SAMHD1)
DNA repair and recombination proteins [BR:
gvr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103592577 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
PDEase_I
PqqF-like_C_4
Motif
Other DBs
NCBI-GeneID:
103592577
NCBI-ProteinID:
XP_008573588
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MQRDDSELPSKRPRCDGSSRTPPNTSAAADRSASPELHPDRRTWGTEQVCSFLKRSGFKE
PGVLKNFRDEKITGSLLPYLDESHLENLGVSSLWERKKLLNDIQQLGQTHSDAPKVINDP
VHGHIEFHPLLIQIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRS
LCEKQPELQITERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEIKWKHEQGSIKMF
EYLVNSNGLRAVMERYGLIPEEDICFIKELIAGPLDSHIKDSSWPYKGRSTEKSFLYEIV
ANKRNGIDVDKWDYFARDCHHLGIQNNFDYDRFIKFARVCEVDNRKYICTREKEVGNVYD
MFHTRNCLHRRAYQHKVGNIVDAMITDALLKADPYIEITGAKGKKYHISTAIDDMEAFTK
LTDNVFLEILYSTNPKLDAAREILKKIEYRNLYKYVGEVQSTGQTKIGEDDYECLPKEVA
DAKSDTELKAEDFIVDVINMDYGMEDKNPIDYLHFYSKNEPSKAIRISKDQVSQLLPERF
AEQVIRVYCKKTDEKSFLAAQQHFVDWSITKNFIKPQDEVTPQKSEFRCTISAQSPAHTR
EAFKARVQLYKDGSV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagacgactcggagctgccgtctaagcggccccggtgcgatggcagctcgaga
accccaccaaacacttccgcagcggcagacaggtccgcgagcccggaactccaccccgac
cgccgcacctggggcacagagcaggtgtgctccttcctaaagcgcagtggcttcaaagag
cccggagtgctgaaaaacttccgagatgagaaaatcacaggctcattactgccctatctt
gatgagtctcaccttgaaaatcttggagtaagttccttgtgggagaggaagaagctgctt
aatgatatccaacaactgggtcaaactcacagcgatgcaccgaaggtaattaatgatcct
gtccatggtcacattgagttccaccctctcctcatccaaatcattgatacacctcaattt
cagcggcttcggtatattaaacagctgggaggcggttattatgtttttccaggagcttca
cacaatcgatttgagcatagtctaggggtaggatatctagcaggatgtctagttcgctca
ctgtgtgaaaaacaaccagagttgcagataactgaacgagatatgctctgtgttcagatt
gctgggctttgtcatgatctcggtcacgggccattttctcatatgtttgatggaagattt
attccacttgctcgcccagagatcaaatggaagcatgaacagggctcaattaagatgttt
gagtacctagttaattctaatggactcagagctgtcatggagcgctatggtcttatccct
gaagaagatatttgctttatcaaggaactaattgcaggaccacttgattcacacatcaaa
gattcttcgtggccatataaaggacgttctacagagaaaagcttcctttatgaaatagtg
gctaataaaagaaatggcattgatgtagacaaatgggattattttgccagggactgccat
catcttggaatccaaaataattttgattatgaccgctttattaagtttgcccgtgtctgt
gaagtagataatagaaagtatatttgtactagagaaaaggaagttggaaatgtgtatgac
atgttccacacacgcaactgtttacaccgtagagcttatcaacacaaagttggcaatatt
gttgatgcaatgattacagatgctctcctcaaagcagacccctacatagagattacaggt
gctaaaggaaaaaagtatcacatttctacagcaattgatgacatggaagccttcactaaa
ttgacagataacgtttttctggagattttatactctactaatccaaaattggatgcagct
cgagagattttaaaaaagattgaataccgtaatctatacaagtatgtgggtgaagtccag
tcaacaggacaaacaaagattggagaggatgactatgaatgccttccaaaagaagttgct
gatgctaaatcagacactgaactgaaggcagaagatttcatagtggatgttatcaacatg
gattatggaatggaggataagaatccaattgattatcttcacttctatagtaagaatgaa
cccagcaaagctatcaggatttctaaagatcaggtttcacagcttctgccagagagattt
gcagagcaggtgattcgagtatattgtaagaagactgatgaaaagagtttccttgctgca
caacaacattttgttgattggtccatcaccaaaaacttcatcaagccacaggatgaagta
acacctcaaaaatcggaatttagatgcaccatttcagcccaaagtccagctcatacccga
gaagcattcaaagccagagtccagctttataaggatggttcagtgtga
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