Galeopterus variegatus (Sunda flying lemur): 103593263
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Entry
103593263 CDS
T08727
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103593263 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gvr03041
]
103593263 (PRPF40A)
Spliceosome [BR:
gvr03041
]
Complex A
U1 snRNP components
U1 related factors
103593263 (PRPF40A)
Complex B
103593263 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
103593263
NCBI-ProteinID:
XP_008574434
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMENHPSSRGPGDGERRLSGSSLCSSSWVS
ADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMS
SVMPGMMMSHMSQASMQPALPPGVNSMDVTAGTASGAKSMWTEHKSPDGRTYYYNTETKQ
STWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTI
VAGSLITKSNLHAMIKAEESSKQEECTTTSSAPVPTTEIPTTMSTMAAAEAAAAVVAAAA
AAAAAAAAANASASTSSNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTP
AIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKE
KRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKES
FQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQL
RKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIR
ALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRF
TNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISST
KRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELDAV
WEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRS
RSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSP
ESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRR
RTLLEQLDDDQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggact
ggagccgagcgtggaggcctcatggtgagtgaaatggagaaccatccttcctcgcggggt
cccggggacggggagcggagattgtccggctcaagcctttgctccagttcttgggtctct
gctgacggcttcctgaggagacggccctcgatggggcaccctggcatgcattatgcccca
atgggaatgcaccctatgggacagagagcaaatatgcctcctgtacctcatggaatgatg
ccacaaatgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtct
tcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgcctta
ccgccaggagtaaacagtatggatgtaacagcaggtacagcatctggtgcaaaatcaatg
tggactgaacataaatcgcctgatggaaggacttactactacaatactgaaacaaaacag
tctacatgggagaaaccagatgatcttaaaacacctgctgagcaactattatccaaatgc
ccctggaaggagtacaaatctgattctggaaagccttactattacaattctcaaacaaaa
gaatcccgctgggccaaacctaaagagcttgaggatcttgaaggataccagaataccatt
gttgctggaagtcttattacaaaatcaaacctgcatgcgatgattaaagctgaagaaagc
agtaagcaagaagagtgcaccacaacatcatcggccccagttcctacaacagaaattccg
accacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgcagctgccgcc
gctgcagcagcagcggctgctgcagccaatgccagtgcttccacttcttcaaatactgtt
ggtggaactgttccagttgttcctgagcctgaagttacttccattgttgctactgttgta
gataatgaaaatacagtaactatttcaactgaggaacaagcacaactgactagcacccct
gctattcaggatcagagtgttgaagtatccagtaatactggagaagaaacgtctaagcag
gaaaccgtagctgattttactcccaaaaaagaagaggaggagagccaaccagcaaaaaaa
acatacacatggaatacaaaggaggaggcaaagcaagcgtttaaggaattattgaaagaa
aagcgggtaccatccaatgcttcatgggagcaagctatgaaaatgatcattaatgatcca
cgatatagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgcctataaagtt
cagacagagaaagaagaaaaagaagaagcaagatcgaaatacaaagaggctaaggaatct
tttcagcgttttcttgaaaatcatgagaaaatgacttccacaaccagatacaaaaaagca
gagcaaatgtttggagaaatggaagtctggaatgcaatatcagagcgtgatcgtcttgaa
atctatgaagatgttttgttctttctttcaaaaaaagaaaaggaacaagcaaagcagttg
cgaaagagaaattgggaagccttaaaaaacatacttgacaatatggctaatgttacatac
tctactacgtggtctgaagcccagcagtatttgatggataatccaacttttgcagaagat
gaagagttacagaacatggacaaagaagatgcattaatttgctttgaagagcacattcgg
gctttagaaaaggaggaggaagaagaaaaacagaagagtttgttgagagaaaggagacga
cagcgaaaaaatagggaatcttttcagatatttttagatgaattgcatgaacacggacaa
ctacattctatgtcatcttggatggaattgtatccaactattagttctgacattaggttc
actaatatgcttggtcagcctggatcaactgcccttgatcttttcaagttttatgttgag
gatcttaaagcacgttatcatgatgagaagaagataataaaagacattctaaaggataaa
ggctttgtagttgaagtaaatactacttttgaagattttgtggcaataatcagttcaacg
aaaagatcaactacattagatgccggaaatatcaagttggctttcaatagtttactagaa
aaggcagaagctcgtgaacgtgaaagagaaaaagaagaggctcgtaagatgaaacgaaaa
gaatctgcatttaagagtatgttgaaacaagctgctcctccaatagaattggatgctgtc
tgggaagatatccgggagagatttgtaaaagagccagcatttgaggacataactctagag
tctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaatgtcaacat
catcattcaaagaacaagaaacattctaagaaatctaaaaaacatcataggaaacgttct
cgctctcgatcggggtcagattcagacgatgatgacagccattcaaagaaaaaaagacag
cgatcagagtcccgttctgcttcagaacattcttctagtgctgagtctgagagaagttat
aagaagtcaaaaaaacataagaagaaaagtaagaaaaggagacataaatctgactctcca
gaatcagatgctgagcgagagaaggataaaaaagaaaaagaccgggaaagtgaaaaagac
agaactagacaaagatcagaatcaaaacacaaatcacctaagaaaaagactggaaaggat
tctggtaattgggacacttctggcagcgaactgagtgaaggggaattggaaaagcgcaga
agaacccttttggagcaactggacgatgatcaataa
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