Galeopterus variegatus (Sunda flying lemur): 103593792
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Entry
103593792 CDS
T08727
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6 isoform X1
KO
K12855
pre-mRNA-processing factor 6
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103593792 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gvr03041
]
103593792 (PRPF6)
Spliceosome [BR:
gvr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103593792 (PRPF6)
Complex C
U5 SnRNP specific factors
103593792 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_PRP39_C
TPR_16
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
FAT
ARM_TT21_2nd
TPR_CcmH_CycH
T7SS_EccA1_N
ARM_TT21_C
TPR_21
Motif
Other DBs
NCBI-GeneID:
103593792
NCBI-ProteinID:
XP_008575094
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MQGRVQEQGHPDNRCLGVSCSATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN
QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR
EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVP
DSFFAKHLQTGESHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKI
GQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRE
TNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVA
QAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIML
SRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMV
EKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTW
MEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAH
CPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARR
LLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEEQEE
LTEKAREAYSQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLES
VRLEHRAGLKNIASTLMAKALQECPSSGVLWSEAVFLEARPQRKTKSVDALKKCEHDPHV
LLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCEN
AEPRHGELWCTVSKDITNWQRKIGEILVLVAARIRNTF
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaagagtgcaggagcaaggtcatcctgataaccggtgtctcggggtctcctgc
agtgccactggctttaccacccggtctgacattgggcccgcccgggacgccaatgatcct
gtggatgatcgccatgcaccgccaggcaaaagaaccgtcggggaccagatgaagaaaaac
caggctgccgatgatgacgacgaggatctgaatgacaccaactatgatgagtttaatggc
tatgctgggagtctcttctcaagtggaccctacgaaaaagatgacgaggaagcagacgcg
atttatgcagccctggataagaggatggatgaaagaagaaaagaaagaagggagcagagg
gagaaagaagaaattgagaagtaccgtatggaacggcccaaaatccaacagcagttctca
gatctcaaaaggaagttggcggaagtcacagaggaagagtggctgagcatccctgaggtt
ggcgatgccagaaacaagcgccagcggaacccccgctatgagaagctgacccctgttcct
gacagtttctttgccaagcatttacagactggagagagtcatacttccgtggatccccga
caaactcaattcggaggtctgaacacaccctatcctggtgggctgaacactccataccca
ggcgggatgacaccaggattgatgacacccggcacaggtgagttggacatgaggaagatt
ggccaagcgaggaacaccctgatggacatgaggctgagccaggtgtctgactcggtgagt
ggacagactgtagttgaccccaaaggctatctgacggatttaaattccatgatcccgacc
cacggaggggacatcaacgatatcaagaaggcccggctgcttctcaagtctgttcgggag
acgaaccctcatcatccgccagcctggattgcgtcagcccgcctggaagaagtcactggg
aagctgcaagtagcccgaaaccttattatgaagggaacggaaatgtgccccaagagtgaa
gatgtctggctggaagcagccagattacagcccggggacacagccaaggctgtggtggcc
caagctgtccgtcatctcccacagtctgttaggatttacatcagagcagcagagctggaa
acagacattcgtgcgaagaagcgggttctacggaaagcccttgagcatgttccaaactcg
gttcgcttgtggaaagcagccgttgagctggaagagcctgaagatgccaggatcatgctc
agccgcgctgtggagtgctgccccaccagtgtggagctctggcttgccctggcgaggttg
gagacctatgaaaatgcccgcaaggtcttaaacaaagcacgtgagaacattcccacagac
cggcacatatggatcacggctgccaagctggaggaagccaatgggaacacgcagatggtg
gagaagatcatcgatcgtgccatcacctctctgcgggccaacggcgtggagatcaaccgt
gagcagtggatccaggatgctgaggagtgtgacagggcggggagcgtggccacctgccag
gcggtcatgcgtgctgtgattggtattgggatcgaggaggaggatcggaagcacacctgg
atggaagacgctgacagttgtgtggcccacaatgccctggagtgtgcacgcgccatctac
gcctatgccctgcaagtgttccccagcaagaagagcgtgtggctgagagctgcgtacttt
gagaagaaccacggcaccagggagtccctggaagcactcctgcagagggccgtagcccac
tgccccaaggcggaggtactgtggctcatgggcgccaagtccaagtggctggcgggagat
gtacctgcagcaaggagcatcttggctttggccttccaggccaaccccaacagcgaggag
atctggctggcagccgtgaagctggagtcagagaacaatgagtatgagcgggcccggcgg
ctgctggccaaggcgcggagcagtgcacccaccgcccgggtgttcatgaagtctgtgaag
ctggagtgggtgctggggaacatcgcggccgcccaggagctgtgtgaggaggccctgaag
cattatgaggacttccccaagctgtggatgatgaagggacagattgaggagcaggaggag
ctgacggagaaggcacgggaggcctacagccaggggttgaagaaatgtccccattccaca
cctctgtggcttttgctgtcccggctggaggagaagattgggcagctgacccgagcacgg
gccatcctggagaagtctcgtctgaagaatccaaagaaccctgggctgtggttggagtcc
gtgcggctggagcaccgtgcagggctgaagaacattgccagcacactcatggccaaggca
ctgcaggaatgccccagctccggcgtcctgtggtctgaagccgtcttccttgaggcaagg
ccacagaggaagaccaagagtgtggacgccctgaagaagtgtgagcacgacccccatgtg
ctcctggccgtggccaagctgttttggagtgagcggaagatcaccaaggccagggagtgg
ttccaccgcacggtgaagatcgactcagaccttggggatgcctgggcgttcttctacaag
tttgagctgcagcacggcactgaggagcagcaggaggaagtgaggaagcgctgtgagaac
gcggagcctcggcatggggagctgtggtgcaccgtgtccaaggacatcaccaactggcag
aggaagattggggagatcctggtgctggtggccgcccgcatcaggaacaccttctga
DBGET
integrated database retrieval system
