Galeopterus variegatus (Sunda flying lemur): 103593819
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Entry
103593819 CDS
T08727
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03040
Spliceosome
gvr05202
Transcriptional misregulation in cancer
gvr05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103593819 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
103593819 (DDX5)
05205 Proteoglycans in cancer
103593819 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gvr03041
]
103593819 (DDX5)
03009 Ribosome biogenesis [BR:
gvr03009
]
103593819 (DDX5)
Enzymes [BR:
gvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103593819 (DDX5)
Spliceosome [BR:
gvr03041
]
Complex A
U1 snRNP components
U1 related factors
103593819 (DDX5)
Complex B
103593819 (DDX5)
Ribosome biogenesis [BR:
gvr03009
]
Eukaryotic type
Pre-60S particles
Helicases
103593819 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
103593819
NCBI-ProteinID:
XP_008575122
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLTRRTAQEVETYRRSKEVTVKGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgcggccgggatcgagggtttggtgcacctcga
tttggaggaagtaggacagggcccttatctgggaagaagtttggaaaccccggggagaag
ttagttaagaaaaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gagcaccctgatttgactagacgcacagcacaagaggtggagacgtacagaagaagcaaa
gaagttacagttaagggtcacaactgtccaaagccagttctgaatttttatgaagcaaac
tttccagcaaatgtcatggatgtgattgcaagacagaactttactgaacccactgctatt
caagctcagggatggccagttgctctaagtgggttggatatggttggagtagcacagact
ggatctgggaaaacattatcttatttgctgcctgccattgtccacatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcaccaactcgggaactggcc
caacaggtgcagcaagtagctgctgaatactgtagagcatgtcgcttgaagtctacttgc
atctatggtggtgctcccaagggaccacaaatacgtgatttggagagaggtgtggaaatc
tgtattgcaacacctggaagactgattgactttttagagtgtgggaaaaccaatctgaga
agaacaacctaccttgtccttgatgaagcagatagaatgcttgatatgggcttcgaaccc
caaataaggaaaattgtggatcagataagacctgacaggcaaaccttaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatata
aacattggtgcattagaactgagtgcaaaccataacattcttcagattgtggatgtgtgt
catgatgttgaaaaggatgaaaaactgattcgtctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaaggtgtgatgagcttaccagaaaa
atgaggagagatgggtggcctgccatgggtatccatggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaagcccctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacattaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccagaggtagaggaggcatgaaggatgaccgtcgggacagatattctgcgggc
aaaaggggtggatttaatacctttagggacagggaaaattatgaccgaggttactctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagtttcaggact
ggtaatccaacagggacttaccagaatggttatgatagcactcagcaatatggaagtaat
gttccaaatatgcacaatggtatgaaccagcaggcatatgcatatcctgctaccgcagct
gcacctatgattggttatccaatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
