Galeopterus variegatus (Sunda flying lemur): 103594005
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Entry
103594005 CDS
T08727
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03082
ATP-dependent chromatin remodeling
gvr04714
Thermogenesis
gvr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103594005 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103594005 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103594005 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gvr03021
]
103594005 (SMARCC2)
03036 Chromosome and associated proteins [BR:
gvr03036
]
103594005 (SMARCC2)
Transcription machinery [BR:
gvr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103594005 (SMARCC2)
Chromosome and associated proteins [BR:
gvr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103594005 (SMARCC2)
PBAF complex
103594005 (SMARCC2)
GBAF(ncBAF) complex
103594005 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
103594005
NCBI-ProteinID:
XP_008575390
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MGDGGQFIWGLFFFPFPLFPQYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKL
PIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNC
LSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMK
RDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEED
YEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGSNYKKRKRSPSPSPTPEAKKKNA
KKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGT
MTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYN
SVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCA
IMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDA
DTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFSDKGKEKPTDMQNFGLRTDMYTKK
NVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIE
DPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE
EVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGTDEARAEGQA
TDEKKEPKELREGGGAIEEEAKEKTSEAPKKDDEKGKEGDSEKELEKSDGDPIVDPEKEK
EPKEGQEEVLKEVVESEGERKAKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIK
SLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMR
ARQQHFQQMHQQQQQPPPTVPPGSQPIPPTGAAGPPAIHGLAVAPASVAPSAGSGAPPGS
LGPSEQIGQAGSTAGPQQQQPTGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVP
GSGHPGMAGNAPLGLPFGMPPPPAPSIIPFGSLADSLSINLPPPPNLHGHHHHLPFAPGT
LPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLP
DPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgggagatggtggacaatttatctggggtctatttttctttcctttccctctgtttccc
cagtatatacaagctgaaccacccactaacaagtccctgtctagcctggttgtacagctg
ctacaatttcaggaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactg
ccgatcaaatgtttcctagatttcaaagcaggaggctccctgtgccacatacttgcagct
gcctacaaattcaagagtgaccagggatggcggcgttatgatttccagaatccatcacgt
atggaccgcaacgtggaaatgttcatgactattgagaagtccttggtgcagaataattgc
ctgtctcgacctaacatttttttgtgcccagaaattgagcccaaactactagggaaatta
aaagacattatcaagagacaccagggaacggtcactgaggataagaacaatgcctcccat
gttgtgtatcctgtcccagggaacttggaagaagaggaatgggtacgaccagtcatgaag
agggataagcaggttcttctgcactggggctactatcctgacagttatgatacgtggatc
ccagccagtgaaatcgaagcatctgtggaagatgctccaactcctgagaaacctaggaag
gttcatgcaaaatggatcctggacacagacaccttcaatgaatggatgaatgaggaagac
tatgaagtaaatgatgacaaaaaccctgtctcccgccgaaagaagatttcagctaagaca
ttgacagatgaggtgaacagcccagattctgatcgccgagacaagaaggggagtaactat
aaaaagaggaagcgctccccatctccttcaccaaccccagaagcgaagaagaaaaatgct
aagaaaggtccctcaacaccttataccaagtcaaagcgtggccacagggaagaggaacaa
gaggatctgacaaaggacatggatgagccctcaccagttcccaacgtagaagaagtgaca
ctgcccaaaacagtcaacactaagaaggactccgagtcagcccccgtcaaaggaggcacc
atgactgacctggatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggat
gagaacagtaccgggaacaagggggagcagaccaagaatccagacctgcatgaggacaac
gtgactgaacagacccaccacatcatcattcccagctatgctgcctggtttgactacaat
agcgttcatgccatcgagcggagggctctccccgagttctttaacggcaagaacaagtcg
aagactccagagatctacctggcctatcgaaacttcatgattgacacttaccgattgaac
ccccaagagtatcttacctccactgcctgccgccggaacctggcgggtgatgtctgtgcc
atcatgagggtccatgccttcctggaacagtggggtcttattaactaccaggtggatgct
gagagtcgaccaacccccatggggcctccgcccacctctcacttccatgtcttggctgac
acaccatcagggctggtgcctttgcagcccaagactccacagggccgccaggttgatgct
gataccaaggctgggcgaaagggcaaagagctggatgacctggtgccagagacggctaag
ggcaagccagagctgcagacctctgcttcccaacaaatgctcaacttttctgacaaaggc
aaagagaaaccaacagacatgcagaactttgggctgcgcacagacatgtacacgaagaag
aacgtgccctccaagagcaaagctgcggccagtgccactcgagagtggacagaacaggag
accctgctactcctggaggcactggaaatgtacaaagatgattggaacaaagtatctgag
catgtgggaagccgcacacaggacgagtgcatcttgcattttcttcgtcttcccattgaa
gacccatacctggaggactcggaggcctccctgggccccctggcctaccagcccatcccc
ttcagtcagtcgggcaaccctgttatgagcactgttgcttttctggcctccgttgttgat
ccccgagttgcctctgctgctgcaaagtcggccctagaggagttctccaaaatgaaggaa
gaggtacccacagccttggtggaggcccatgttcggaaagtggaagaagcggccaaagtg
acaggcaaagcagacccagccttcggtctggaaagcagtggcattgcgggaaccacctct
gatgagccagagcggattgaggagagtggaactgacgaggcaagggcggagggccaggcc
acagatgagaagaaggagcccaaggaactccgagaaggaggaggggctatagaagaagaa
gcaaaggagaaaaccagtgaggctcccaagaaggatgacgagaaagggaaagaaggcgac
agcgagaaggagttggagaagagtgatggggacccaatagttgatcctgagaaggagaag
gagccaaaggaagggcaggaggaagtgctgaaggaagtggtggaatcggagggggaaagg
aaggcaaaggtggagcgggacattggtgagggcaacctctccaccgctgctgctgccgcc
ctggctgctgctgcagtgaaggcaaagcacttggctgccgttgaagaaagaaagatcaaa
tctttggtggccctgctggtggagactcagatgaaaaagttggagatcaaactccgccac
tttgaggagctggagacgatcatggaccgggaacgagaagcactggagtatcagaggcag
cagctcctggccgacagacaagccttccacatggaacagctgaagtatgcagagatgagg
gctcggcagcagcatttccaacagatgcatcaacagcagcagcagccaccaccaaccgtg
cccccaggctcccagcctatcccccccacaggggctgctgggccacccgcaatccatggc
ttggctgtggctccggcctcggtggctccttctgccggcagtggggcccctcctggaagc
ttaggtccttctgaacagattgggcaggcggggtcaacggcagggccacagcagcagcaa
ccaactggagccccccagcctggggcagtcccaccaggagtacccccccccggaccccat
ggcccctcaccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgcca
ggcagcgggcacccaggcatggcgggtaatgctcctttgggtttgccttttggcatgcca
cctcctcctgctccatccatcatcccatttggtagtctagccgactccctcagtattaac
cttccccctcctcctaacctgcatgggcatcaccatcatctcccattcgccccgggcact
ctccccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcg
accaccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccag
agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca
gacccaggcacccccctgcctccagatcccacagccccgagcccaggcacagtcacccct
gtgccacctccacaatga
DBGET
integrated database retrieval system
