Galeopterus variegatus (Sunda flying lemur): 103594719
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Entry
103594719 CDS
T08727
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr05016
Huntington disease
gvr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
103594719 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
103594719 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103594719 (HTT)
04131 Membrane trafficking [BR:
gvr04131
]
103594719 (HTT)
03029 Mitochondrial biogenesis [BR:
gvr03029
]
103594719 (HTT)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103594719 (HTT)
Membrane trafficking [BR:
gvr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103594719 (HTT)
Mitochondrial biogenesis [BR:
gvr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
103594719 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
103594719
NCBI-ProteinID:
XP_008576193
UniProt:
A0ABM0R6F2
LinkDB
All DBs
Position
Unknown
AA seq
2996 aa
AA seq
DB search
MELFLLCSDDAESDVRMVADECLNKVIKALMDSSLPRLQLELYKEIKKNGAPRSLRAALW
RFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFGNFANDSEI
KVLLKAFIANLKSSSPTIRRTAAGAAVSICQHSRRTQYFYSWLLNVLLGLLVPVEDEHST
LLILGVLLTLRYLVPLLQQQVKDMSLKGSFGLTQKEMEVSPSAEQLVQVYDLTLRHTQHQ
DHNVVTGALELLQQLFRTPPPELLQALTTTGGIGQLAVAKDESSGRSRSGSIVELIGKVL
LGEEEALDDDSESRSDVSSSAFAASVKGEISGELAASPGVSTAGSADHDIITEQPRSQHT
LQADSVDLAGCDLSSAATDGDEEDILSHSSSQISAVPSDPAMDLNDGTQASSPISDSSQT
TTEGPDSAVTPSDSSEIVLDGADSQYSGSQTGQPHDEDEEVAGLPPDEASEPFENSLVAL
QQAHLLKNMGHSRQPSDSSIDKFVSRDEAAEPGDQGNKPCRIRGDIGQSTDDDSAPLVHC
VRLLSASFLLTGEKNALVPDRDVRVSVKALALSCVGAAVALHPESFFSKLYKVPLDITEC
PEEHYVSDILNYIDHGDPQVRGASAILCGTLISSILSRSRFHVGDWMGAIRTRTGNTFSL
VDCIPLLRKTLKDESSVTCKMACTAVRHCVMSLCSSSYSELGLQLIVDVLALRNSSYWLV
RTELLETLAEIDFRLVSFLEAKAENMHRGAPHHTGLLKLQDRVLNNVVIYLLGDEDPRVR
HVAAASLMRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQPPSHFSVSTITRIY
RGYNLLPSITDVTMENNLSRVVAAVSHELITSTTRALTFGCCEALCLLSTAFPVCIWSLG
WHCGAPPLSASDESRKSCTVGMATVILTLLSSAWFPLDLSAHQDALILAGNLLAASAPKS
LRSPWTSEEEANPAATKQEEVWPALGERTLVPMVEQLFSHLLKVINICAHVLDDVAPGPA
IKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSPKKGSEASAASRQSDTSGPVTTSKS
SSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSALDVLSQILELATLQ
DIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFDGLSSNPSKSQGRAQR
LGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDTSGWFDVLQKVSTQLKTN
LTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQLRVNYCL
LDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLC
DGIMASGRKAVTHAIPALQPIVHDLFVLRGANKADAGKELETQKEVVVSMLLRLIQHHQV
LEMFILVLQQCHKENEDKWKRLSRQVADIILPMLAKQQMHIDSHEALGVLNTLFEILAPS
SLRPVDMLLRSMFVTPNTMASVNTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPY
LICCPVINRLRDGDSNSTPEEHSKGRQMKNLPEETFSRFLLQLVGILLEDIVTKQLKVEM
SEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATKLFTSDGCEGSFYTLESLNAQVRS
MVPSHPALVLLWCQILLLVNHTDYRWWAEVQQTPRRHSLSSTKLLSPQMSGEEEDSDLAA
KLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLVVNHIQDLICLSHEPPVQDFISAVH
RNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLTLYVDRLLCTPFRVL
ARMVDTLACRRVEMLLAANLQSSTAQLPVEELNRIQEYLQSSGLAQRHQRLYSLLDRFRL
SAVQDSLSPSPPVTSHPLDGDRHMSLETMSPDKDWYIRVVRSQCWTRSDSALLEGAELVN
RIPAEDMSAFMMNSEFNLSLLAPCLSLGMSEISGGHKSPLFEAARGVTLDRVSSIVQQLP
AVHQVFQPFLPTEPTAYWSKLNDLFGDATLYQSLTTLARALAQYLVVVSKLPVSLHLPPE
KERDMVKFVVMTLEALSWHLIHEQVPLSLDLQAGLDCCCLALQLPSLWSVVSCAEFVTHA
CSLIHCVRFVLEAIAVQPGDQLLSPERRINTRKAVREDEIGSDTQSPKYIITACEMVAEM
VESLQSVLALGHKRNSSVPAFLTPVLKNIVISLARLPLVNSYTRVPPLVWKLGWSPKPGG
DFGTVFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPLVMEQEE
SPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALDTRIGRK
LSIIRGIVEQEIQAMVSKRENITTHHLYQAWDPVPSLSPATTGALISHEKLLLQINPERE
LGNMSYKLGQVSIHSVWLGNSITPLRQEEWDEEEEEEADVPAPSSAPTSPVNSRKHRAGV
DIHSCSQFLLELYARWILPSSSARRTPVILISEVVRSLLVVSDLFTERNQFEMMYLTLTE
LRRVHPSEDEILVQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRSSHLPSRIGALHGV
LYVLECDLLDDTAKQLVPVVSDYIISNLKGIAHCVNIHSQQHVLVMCATAFYLIENYPLD
VGPEFSASVIQMCGVMLSGSEESTPSIIYHCALRGLERLLLSEQLSRLDTESLVKLSVDR
VNVHSPHRAMAALGLMLTCMYTGKEKISPGRASDPNPAAPDSESVIVAMERVSVLFDRIR
KGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHST
GQSSMVRDWVMLSLSNFTQRTPVAMATWSLSCFFVSASTSPWVSAILPHVISRMGKLEQV
DVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAVPGSPYHRLLTCLRNVHKVTTC
NT seq
8991 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtttctgctgtgcagtgatgatgcagagtcagatgtcaggatggtggctgat
gaatgcctcaacaaagttataaaagctttgatggattctagtcttccgagattacagtta
gaactctataaggagattaaaaagaatggtgcccctcgaagtttgcgtgctgccctgtgg
aggtttgctgagctggctcacctggttcgccctcagaaatgcagaccttacctggtgaac
cttctgccgtgcctgactcgaaccagcaagagacccgaggagtcagtccaggagactttg
gctgcagctgtgcccaagattatggcgtcttttggcaattttgcaaatgacagtgaaatt
aaggttctgctaaaggctttcatagcaaatctgaagtcaagctcccctaccattcggcgg
acagcagcaggagcagcagtgagcatctgccagcactccagaaggacgcagtatttttat
agctggctactaaatgtgctcttaggtctgcttgtccctgtcgaggatgaacactccacc
ctcctgattcttggtgtgctgctcactttgagatatttggtgcccttgctgcagcagcag
gtcaaggacatgagcctgaaaggcagctttgggttgacacagaaagaaatggaagtctct
ccctctgcagagcagcttgtccaggtttatgacctgaccttgcgtcatacacagcaccag
gaccacaacgtcgtgacgggagcccttgaactcctgcagcagctctttaggacccccccg
cctgagctcctgcaagctctgaccacgacaggtgggattgggcagctggcggtggctaaa
gatgagtccagtggccgaagtcgtagtgggagtattgtggaactcataggcaaagtgctc
ttaggagaagaagaagccttggacgatgactctgagtcgaggtcagacgtcagcagctca
gcctttgcagcctcagtgaagggtgagatcagtggagagctggctgcttctccgggagtc
tccactgctgggtctgcggatcacgacatcataactgagcagccacggtcacagcacacg
ttgcaggcagactcggtggatctggctggctgtgacttgtcgagtgcagccaccgatggg
gacgaggaggatatcttgagccatagttctagccaaatcagcgctgtcccgtctgaccct
gccatggacctgaacgatgggacccaggcctcttcgcccatcagcgatagctcccagacc
accactgaagggcctgattcagctgtgaccccttcagacagttcggaaattgtgttagat
ggtgctgatagccagtactcaggctcgcagactggacagccgcacgatgaagatgaggag
gtcgcaggtcttcctcccgatgaagcctcggaaccttttgaaaactctttagttgccctt
caacaagcacatttgttgaaaaacatgggtcatagcaggcagccttctgacagcagtata
gataaatttgtatcaagagatgaagctgctgaaccaggtgatcaaggaaacaagccttgc
cgtatcagaggagacatagggcagtccactgatgatgattctgcacctcttgtccattgt
gtccgccttttatctgcttcatttttgctaactggggaaaaaaatgcgctggttccagac
agggatgtgagggtcagtgtgaaggccctggcactcagctgtgttggagcagctgtggcc
cttcatccggaatctttcttcagcaaactgtacaaagtacctcttgacatcacagaatgc
cctgaggagcattatgtctcagacatcttgaactacattgatcacggggacccacaggtc
agaggagcctctgccattctctgtgggacccttatctcctccatcctcagtaggtcccgc
ttccatgtgggagactggatgggcgccattagaactcggacaggaaatacattttctctg
gtggactgcattcctttgctgcggaaaactttgaaggatgaatcttctgttacttgcaag
atggcttgtacagctgtgcggcactgtgtcatgagcctctgcagcagcagctacagcgag
ttaggcctgcagctgattgtcgatgtgctggctctgaggaatagttcctactggctggtg
aggacagaacttttggaaactcttgcagagattgactttaggctggtgagctttttggag
gcgaaagcagaaaacatgcatcgaggggctcctcatcatacagggcttttaaaactgcaa
gaccgggtgctcaacaatgttgtcatctatttgcttggggatgaagaccccagggtgcga
cacgttgctgctgcgtccttaatgaggcttgtgccaaagctgttttataaatgtgaccaa
ggacaggctgatccagtagtggctgtggcaagagatcaaagcagtgtttacctgaaactt
ctcatgcacgagacgcagcctccgtctcacttctctgtcagcacaataaccagaatatat
agaggctataacttactcccaagcataacagatgtcactatggaaaacaacctttcaaga
gttgttgcagcagtttctcatgaactaatcacgtcaaccacgcgagcactcacatttgga
tgctgtgaagctttgtgtcttctttcgactgccttcccagtttgcatctggagtttaggt
tggcactgtggagctcccccgctgagtgcctcagatgaatctagaaagagctgtactgtc
gggatggccacagtgattcttaccctactctcatcagcttggttcccattggatctctca
gcccatcaagatgctctgattttggctggaaacttgcttgcagccagtgcccccaaatct
ctgagaagtccatggacctcagaagaagaagccaaccctgcagctaccaaacaagaggag
gtctggccagccctgggtgagcggacgctggtgcccatggtggagcagctcttctcccac
ctgctgaaggtgattaacatctgcgcccatgtcttggacgatgtggctcctgggccagcg
ataaaggcagccttgccttctctaacaaatcccccttctctaagtcccatccgacgaaag
ggaaaggagaaagaaccaggagaacaagcatcagtaccgttgagtcccaagaaaggcagc
gaggccagtgcagcctctagacagtctgatacctcagggcctgttacaacaagtaaatcc
tcatctctggggagtttctatcatcttccttcatacctcaaattgcatgatgtcctgaaa
gctactcacgctaactacaaggtcaccttggatcttcagaacagcactgaaaagtttggt
gggtttctgcgctctgccttggatgttctctctcagattctagaactggcaacactgcag
gacatcgggaagtgtgttgaagagatcctaggatacctgaaatcttgctttagtcgagag
ccaatgatggcaacggtttgtgtacaacagttgttgaagactctctttggaacaaacttg
gcctcccagtttgatggcttatcttccaaccccagcaagtctcaaggacgagcacaacgc
cttggctcgtccagcgtgaggccaggcttgtatcactactgcttcatggctccgtacacc
cacttcacccaggccttagcagatgccagcctgcggaacatggtgcaggcggagcaggag
cacgacacctcgggatggtttgatgtacttcagaaagtgtctacccaattgaagacaaac
ctcaccagcgtcacaaagaaccgtgcagataagaatgctattcataatcacattcgttta
tttgaacctcttgttataaaggctttaaaacagtacacgacgacaacatctgtgcagtta
caaaagcaggttctagatttgctggcacagctggttcagttacgggttaattactgtctt
ctggattcagatcaggtgtttattgggtttgtgttgaaacagtttgaatacatcgaggtg
ggccagttcagggaatcagaggcaattattccaaacatctttttcttcctggtattactg
tcttatgaacgctatcattcaaaacagatcattggaatccctaaaatcattcagctgtgt
gatggcatcatggccagtgggaggaaggctgtgacacatgccatacctgctctgcagccc
atagtccatgacctctttgtgttaagaggagcaaataaggctgatgcaggaaaagagctt
gaaacccagaaggaagtggtggtgtcaatgctactgagactcatccagcaccatcaggtg
ttggagatgttcattctcgtcctgcagcagtgccacaaggagaacgaagacaagtggaaa
cggctgtctcggcaggtcgctgacatcatcctcccgatgctagccaagcaacagatgcac
attgactctcatgaagcccttggagtcttaaatacgttatttgagatactggccccttcc
tccctccgtccagtggacatgcttttacggagtatgtttgtcactccaaacacgatggca
tctgtgaacactgttcagctgtggatatcagggatcctagccattttgagggttctaatt
tcccagtcaactgaagatattgttctttctcgtattcaggagctctccttctctccatat
ttaatctgctgtccagtaattaataggttaagagatggggacagtaattcaaccccggaa
gaacacagtaaagggagacaaatgaagaatttgccagaagaaacattttcaaggtttctg
ttacagctcgtcggtattcttttagaggacattgttacaaaacagctgaaagtggaaatg
agtgaacagcaacatactttctattgccaagaactaggcacgctgctgatgtgtctgatc
cacatcttcaagtctggaatgttccggagaatcacagcagctgccactaagctctttacc
agcgatggctgtgagggcagcttctataccctggagagcttgaacgcacaggtgcgctct
atggtcccctctcacccagccctggtgctgctctggtgtcagatcctgctgctcgtcaac
cacactgactaccgctggtgggcagaggtgcagcagactcccagaagacacagtctgtcc
agcacaaagttactcagtcctcagatgtctggagaggaggaggattctgacttggcagcc
aaacttggaatgtgcaatagagaaatagtgcgaagaggggctctcattctcttctgcgat
tatgtctgtcagaacctccatgactcggagcacttaacgtggctcgtagtgaaccacatt
caagatctgatctgtctgtcccacgagcccccggtgcaggacttcattagtgctgttcat
cggaattctgctgctagtggcctcttcatccaggcaatccagtctcgttgtgaaaatctc
tccacacccaccactctgaagaagactctccagtgcttggaaggcatccacctcagccag
tcaggtgctgtgctcacgttgtatgtggacaggcttctgtgcacgcccttccgtgtgctg
gctcgcatggtggacaccctcgcctgtcgccgggtagaaatgcttttggctgcaaattta
cagagcagcacggcccagttgccagtggaagaactaaacagaatccaggaataccttcag
agcagcgggctcgctcagagacaccaaaggctctattccctgctggacaggtttcgtctc
tctgctgtgcaagactcactcagcccctcccctccggtcacttctcacccgctggatggg
gacaggcacatgtccctggaaacaatgagtccagacaaagattggtacattcgtgttgtc
agatcccagtgttggaccaggtcagattctgcactgctggaaggtgcagagctggtgaat
cggatccctgccgaagacatgagtgccttcatgatgaactcggagttcaacctaagctta
ttagctccatgcttaagcctgggcatgagtgaaatttctggtggccacaagagtcctctt
tttgaagcagcccgtggggtgactctagaccgtgtgagcagcattgttcaacagcttcct
gctgtccaccaggtcttccagcccttcctgcccacagagcccacagcctactggagcaag
ctgaatgatctatttggggatgccacgttgtatcagtccctgaccactctggcccgggcc
ctggcgcagtatctggtggtggtctccaaactgcctgtcagtttgcaccttcctcctgag
aaggagagggacatggtgaaatttgtggtgatgaccctcgaggccctgtcatggcatttg
atccacgagcaggtcccactgagcttggatctccaggcggggctagattgctgctgcctg
gccctgcagctgcccagcctctggagtgtggtctcctgtgcagagtttgtgacccatgcc
tgctccctcattcactgcgtgcggttcgtgctggaggccattgcagtgcagcctggagac
cagcttcttagtccagaaagaaggataaatactcgaaaggctgtcagagaggacgaaatt
ggttcagacacacagagtcctaagtatatcatcacggcctgcgagatggtggcagaaatg
gtggagtctctgcagtcggtgttggctttgggtcataagaggaacagcagtgtgccagcg
ttcctcacccctgtgctcaagaacatcgtcatcagcctggcccgcttgccccttgtcaac
agctacacacgcgtgccccccctggtgtggaaactcggatggtcacctaaaccaggtggt
gattttggcacagtgttccccgagatccctgtggagttcctccaggaaaaggaagtcttt
aaggagttcatctaccgcatcaacacactagggtggaccagtcgtacccagtttgaagaa
acttgggccaccctccttggtgtgctggtgacgcagccccttgtgatggagcaggaggag
agcccaccggaggaagacacggagaggacccagatcaacgtcctggctgtgcaggctatc
acttccctggtgctcagtgcaatgactgtgcccgttgccggcaacccagctgtgagctgc
ttggagcagcagccccggaacaagcccctgaaagctcttgataccaggattgggaggaag
ctgagcattatcagagggattgtggagcaggagatccaagcaatggtttcaaagagagag
aatatcaccacccatcacttataccaggcgtgggatcctgtgccctctctgtctccggct
actacaggcgcccttatcagccatgagaagctgctgctgcagatcaaccctgagcgcgag
ctggggaacatgagctacaagctgggccaggtgtccatacactctgtgtggctgggaaac
agcatcacacctctgcgacaggaggagtgggacgaggaggaggaggaggaggccgatgtt
cccgcaccttcatcagcacccacatctccagtcaactccaggaaacaccgggctggagtc
gacatccactcctgttcacagtttctgcttgaattgtacgctcgctggatcctgccgtcc
agttcggccagaaggacccccgtcatcctcatcagcgaagtggttcgatctcttctggtc
gtctcagatttgtttactgagcgcaaccagtttgagatgatgtacctgacgctgacagag
ctgcggagggtgcatccttcagaagacgagattcttgtgcagtacttggtgcccgccacc
tgcaaggcagccgccgtccttggaatggacaaagccgtggcagagccagtcagccgcctg
ctggagagcacactcaggagcagccacctgcccagcaggatcggagccctgcacggcgtc
ctctacgtgttggagtgtgacctcctggacgacactgccaagcagctcgtccccgtcgtc
agcgactatatcatctccaacctcaaagggattgcccactgtgtgaacatccacagccag
cagcacgtgctggtgatgtgtgccactgcgttctacctgatcgagaactaccctctggac
gtggggccagagttctcagcatcagtaatacagatgtgtggggtgatgctgtccggaagt
gaggagtccactccctccatcatttaccactgcgccctccgaggcctggagcgcctcctg
ctctcagagcagctctcccggctggacacggaatccctggttaagctgagcgtggacaga
gtgaatgtacacagcccacatcgggccatggcggccctgggcctgatgctcacctgcatg
tacacaggaaaggagaaaatcagtccgggtagagcctcggaccctaaccctgcagcccca
gacagcgagtcagtgattgttgccatggagcgggtgtctgtgcttttcgacaggatcagg
aaagggtttccctgtgaagccagggtggtggcaaggatcctgcctcagtttttagatgac
ttcttcccaccccaggatgtcatgaacaaggtcattggggagtttctgtccaaccagcag
ccatacccccagttcatggccactgtcgtgtacaaggttttccagactctgcacagcact
gggcagtcatccatggtccgggactgggtcatgctctccctctccaacttcacgcagagg
accccggtcgccatggccacgtggagcctctcctgcttctttgtcagcgcctccaccagc
ccgtgggtttcagccatccttccgcacgttatcagcaggatgggcaagctggagcaggtg
gacgtgaaccttttctgcctggttgccacagacttttacagacaccagatagaggaggag
ctcgaccgcagggccttccagtctgtgtttgaggtggttgcagtgccaggaagcccgtac
caccggctgctgacttgtttgcgaaatgtccacaaggttaccacctgctga
DBGET
integrated database retrieval system
